Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00603 ATGCAAAGAATGCCAAAGCAAGACACCATTCTTCACTGCACTTTGTTCTTGCTACTCTTGCAGATTCTCACAGCTCCCAAACCAGCAACATGCAAATCCACCATAGAACCCTGCACCAACAACGACTCATGCAACGCGCTCTTAGGCTACACACTCTACACTGACCTTAAAGTCTCCGAGGTAGCTTCACTCTTTCAAATCGACCCTATTTCTCTCCTCACCGCAAACGCCATCGACATATCTTACCCTGACGTGGAGCACCATATTCTCCCTTCCAAGCTCTTCATCAAGGTTCCAATTTCATGCTCCTGCGTCGACGGGATCCGAAAATCGGTTTCAACGCATTACAAGACTCGCCCTTCGGACACGCTTTCTTCCATTGCAGACTCTGTCTATGGAGGTTTGGTATCTGCGGACCAGCTTTCGGAGGCTAACTCCATAAGTGACCCTTCGGTTCTTGATGTGGGTCAGAGCCTTTTGGTGCCTCTTCCTTGTACTTGTTTTAATGGCACTGATAATTCACTTCCAGCGATTTACATGTCCTATGTGGTTCAGCCTGTTGATTCTTTGGCTGCTATTGCGGCTAGGTATTTCACTACTTTAACTGATTTGATGGATGTTAATGCCATGGGAAGTACTGCTATTACTGATGGTGATATTCTTGCCATTCCAATTCCGGCTTGTGCTTCAAATTTCCCAAGATCTTCTTCTGATTTTGGCTTGCTTGTTCCCAATGGAAGTTATGCCATTACAGCAGGGCATTGTGTGCAGTGTAGCTGTGGACCGCGGGATCTTAATTTGTATTGTATGCCGGCTTCGCTGGCTGTTTCTTGCTCCAGCATGCAATGTAAAAACAGCAATCTTATGCTTGGGAATGTTACGATCCAACAAGGTAGTGGCGGCTGCAATGTTACTTCTTGTAACTATGATGGCATTGTTAATGGAACCATAATGACAATGTTGACACCATCCCTTCAACCTCGATGTCCAGGGCCTAGGGAATTCCCCCCTCTCATTGCCCCACCTACATCTATAAGGAGAGATTCAGAACTAGCGCCAGCACCAGCACCTCAATCAGATGGAATCGGTCTAGGAACGCCCAAATCCTCAGTGGTTCCTTCAACAACAGGTCTTCCAGGATTCCCGCCGGCAAATGGTCCTATTAGCGCGCTTTCTTCTGGTGCTTCTGCCGCTTGCTCCTTGGTTATTCCATCACCCACCATGACATCTGCACTTGTGTTATTACTCGTCAAGTTGATGATCCCTGTGGCATTGTAA 1278 0.4695 MQRMPKQDTILHCTLFLLLLQILTAPKPATCKSTIEPCTNNDSCNALLGYTLYTDLKVSEVASLFQIDPISLLTANAIDISYPDVEHHILPSKLFIKVPISCSCVDGIRKSVSTHYKTRPSDTLSSIADSVYGGLVSADQLSEANSISDPSVLDVGQSLLVPLPCTCFNGTDNSLPAIYMSYVVQPVDSLAAIAARYFTTLTDLMDVNAMGSTAITDGDILAIPIPACASNFPRSSSDFGLLVPNGSYAITAGHCVQCSCGPRDLNLYCMPASLAVSCSSMQCKNSNLMLGNVTIQQGSGGCNVTSCNYDGIVNGTIMTMLTPSLQPRCPGPREFPPLIAPPTSIRRDSELAPAPAPQSDGIGLGTPKSSVVPSTTGLPGFPPANGPISALSSGASAACSLVIPSPTMTSALVLLLVKLMIPVAL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00603 425 SMART LysM_2 115 162 IPR018392 -
Adu08g00603 425 SMART LysM_2 181 224 IPR018392 -
Adu08g00603 425 Pfam LysM domain 116 162 IPR018392 -
Adu08g00603 425 Pfam LysM domain 182 224 IPR018392 -
Adu08g00603 425 ProSiteProfiles LysM domain profile. 114 161 IPR018392 -
Adu08g00603 425 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 23 412 - -
Adu08g00603 425 SUPERFAMILY LysM domain 180 225 IPR036779 -
Adu08g00603 425 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 3 23 412 - -
Adu08g00603 425 CDD LysM 114 161 IPR018392 -
Adu08g00603 425 CDD LysM 181 223 IPR018392 -
Adu08g00603 425 ProSiteProfiles LysM domain profile. 180 223 IPR018392 -
Adu08g00603 425 MobiDBLite consensus disorder prediction 348 369 - -
Adu08g00603 425 Gene3D LysM domain 168 235 IPR036779 -
Adu08g00603 425 Gene3D LysM domain 108 167 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00603 Adu-Chr8 10883351 10886796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00603 15 400 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 69.054 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00603 - - gmx:100808966 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00603 08 10883351 10886796 Adu08g00603 08 10883351 10886796 ECH