Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00397 ATGGACACAGCTCAGTGGGCACAGGGAATAGGAGTGGTAAAAGCAATGGAAGGTTCGTCAACAAAAGCGTGTTCTTCATCTTCGGTGTTAGAGAGAAGAGCAAGGCCAGTGAAGGATCAAGCACTTAACTGTCCACGGTGCAACTCAACCAACACAAAATTCTGTTACTACAACAACTACAGCCTCTCTCAGCCACGCTACTTCTGCAAAACTTGCAGAAGGTATTGGACTGAAGGTGGTTCCTTGAGAAACGTTCCCGTTGGCGGCGGTTCCAGAAAGAACAAGAGATCCTCCTCCACTCCTGCTTCATCACCATCATCATCTTTAACTAATAAGAACCCAAAGATCATCCATCAAGGACAAGATCTTAACTTAGCATATCCACCACCACCACCACCACCTCCTCATCATCATGACGATTCTGCTACGGAGTTTCTGAGAAGTGGGATCAATACTACTACTACTTCAAGGGGATTGAATTCTTTTATGCCGATGTCGCTTTCGGATTCTACGATGTATAGTACGGCAGGGTTTGGTGCTCCAATGCAAGAGTTCATCAAATCTGGTGGGCTTAACTTTAGTCTTGAAGAAGGGTTTGAGAGTGGTGGTGGTGGTGCAAGGGTTTTGTTTCCTTCTTCAGAGGAAAAGAATACCAATAGAACTGATTCAACTACTGCTGGCTTTTGGAATGGCATGCTAGGTGGAGCTTCATGGTAG 717 0.4547 MDTAQWAQGIGVVKAMEGSSTKACSSSSVLERRARPVKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSTPASSPSSSLTNKNPKIIHQGQDLNLAYPPPPPPPPHHHDDSATEFLRSGINTTTTSRGLNSFMPMSLSDSTMYSTAGFGAPMQEFIKSGGLNFSLEEGFESGGGGARVLFPSSEEKNTNRTDSTTAGFWNGMLGGASW 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00397 238 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Adu08g00397 238 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Adu08g00397 238 Pfam Dof domain, zinc finger 39 96 IPR003851 GO:0003677|GO:0006355
Adu08g00397 238 MobiDBLite consensus disorder prediction 91 118 - -
Adu08g00397 238 PANTHER DOF ZINC FINGER PROTEIN DOF1.8 21 234 - -
Adu08g00397 238 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 21 234 IPR045174 GO:0003700|GO:0006355
Adu08g00397 238 MobiDBLite consensus disorder prediction 83 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00397 Adu-Chr8 7077275 7078693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00397 32 238 C2C2-Dof Transcription Factor Family AT3G61850 43.284 4.71e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu08g00397 zf-Dof 8.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00397 - - adu:107460523 456.832