Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00349 ATGTCTGGTCATGGTGAACACCATAGCGTTCCCCTTTCGGTGCTGCTGAAGCGCGAATTGGTGAACGAGAAAATCGAGAAGCCGGAGATTGTGTACGGCCAAGCCAGCCAGAGCAAGAAAGGAGAGGATTTTATTCTGCTCAAGAACGAATGCCAGAGGGTCATGGGAGATGGCGTCTCCACATTTTCTGTTTTCGGGCTATTTGATGGTCACAATGGAACTGCTGCTGCTATTTATGCTAAGGAGAATCTTCTAAACAACATTTTAAGTGCAATTCCTTCAGATCTTAACAGAGATGAGTGGATAGCAGCATTGCCCAGGGCTTTGGTTGCAGGATTTGTGAAAACTGACAAAGATTTTCAACAGAAAGCAAAAACATCGGGAACAACTGTAACCTTTGTGATTCTTGAAGGATGGGTGGTAACAGTTGCATCAGTCGGTGATTCGCGTTGCGTACTTGAACCTGCTGAAGGTGGTATTCATTACTTGTCAGCGGATCATAGACTTGAAACCAATGCAGAAGAGAGGGTCCGCATAACCTGTAGCGGGGGTGAGGTTGGCCGGCTAAATACAGGTGGAGGAGCAGAGGTTGGCCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCGAGATCCATTGGTGATGCAGATGTTGGTGAATTTATTGTTCCTGTACCATATGTAAAGCAAGTGAAGCTTTCTAGTGCCGGAGGAAGGCTTGTTATCAGCAGTGATGGTGTCTGGGACTCTCTAACTCCAGAAGTGGCCTTGGATTGTTGTCGTGGCATGTCAGCAGAGGCTGCAGCACCACAAATTGTGAATGAAGCTTTACAAGCAAAGGGTCTTAGAGATGACACAACCTGCATTGTTGTTGATATATTACCCCAAGAGCAGCCGCATACTTCTGTACGAACTCAAAAGAAACCGATGAAAGGAATTATGAAGATCTTCCGCAAAAAGTGCTCCGAATCATCATCTCATACCAACAAAGAATATGTAGAGCCAGATATTGTACGGGAGCTCTATGAGGAAGGTTCTGCTATGCTTTCAGAGAGGTTAGAGACAAAATATCCACTCTGCAACATGTTCAAGTTGTTTATCTGTGCTGTGTGTCAAGTAGAGATCAAACCAGGGGAGGGTATCTCAATACATGCAGGGAAGACCAACCCTGGAAAATTGCGTCCATGGGATGGACCTTTTCTTTGCTCAAGTTGCCAAGAGAAGAAGGAAGCCATGGAAGGGTTACGGAAATCAGGAAGACATCGCGGCAGTGACAGTGACGACTAA 1287 0.4592 MSGHGEHHSVPLSVLLKRELVNEKIEKPEIVYGQASQSKKGEDFILLKNECQRVMGDGVSTFSVFGLFDGHNGTAAAIYAKENLLNNILSAIPSDLNRDEWIAALPRALVAGFVKTDKDFQQKAKTSGTTVTFVILEGWVVTVASVGDSRCVLEPAEGGIHYLSADHRLETNAEERVRITCSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDADVGEFIVPVPYVKQVKLSSAGGRLVISSDGVWDSLTPEVALDCCRGMSAEAAAPQIVNEALQAKGLRDDTTCIVVDILPQEQPHTSVRTQKKPMKGIMKIFRKKCSESSSHTNKEYVEPDIVRELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISIHAGKTNPGKLRPWDGPFLCSSCQEKKEAMEGLRKSGRHRGSDSDD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00349 428 PANTHER ALPHABET, ISOFORM E-RELATED 3 422 - -
Adu08g00349 428 CDD PP2Cc 39 293 IPR001932 -
Adu08g00349 428 Pfam Protein phosphatase 2C 42 283 IPR001932 -
Adu08g00349 428 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 3 422 - -
Adu08g00349 428 Gene3D - 31 302 IPR036457 -
Adu08g00349 428 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
Adu08g00349 428 SMART PP2C_4 21 291 IPR001932 -
Adu08g00349 428 SUPERFAMILY PP2C-like 37 293 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00349 Adu-Chr8 6200830 6204936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00349 1 427 PP2C-type Phosphatase Gene Family AT1G47380 77.103 0.0 700
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00349 08 6200830 6204936 Adu08g00349 08 6200830 6204936 ECH
Adu06g03203 06 110360567 110365643 Adu08g00349 08 6200830 6204936 PCT