Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00338 ATGGACACGAGAAGGAGGGTGAGATTAGAGCCTAAGAAAGCTCAGACAGGAGCACATGATGATGATCATCATCATAGAGTTGGTCCTAACCTCTTGAATGAAAAGGCAGAGATGCGGGAAAGTTTGGCACAAGGAAAAGGCAGAGCAAGCAGCAAGGAGAGAAAATTGGCCTTGCAACAAGACGTGGAGAGGTTGAAGAAGAAGCTTAGGGACGAAGAGAACATCCACAGGGCATTGCAGAGAGCTTTCAACAGACCCTTGGGTGCTCTCCCTCGTCTTCCTCCCTATCTCCCTCCCAATACCCTGGGACTTCTTGCGGAGGTGGCGGTGCTGGAGGAAGAAATTGCAAGGCTTGAAGAGAAGGTGATGCATTTCAGGCAGGACTTGTATCAAGAAGCTGTATATACATCATCCTCCAAGATGAAAATGGATCATTCATCTCGTTTAGTTAAATTGAAGTCTCCTTCCCCAACAATTACACTTCCCGAGGATAGGCAAGGAAAAGAGAACCAGTCATGTAGTAATTCTCACAAGAACACCAAGCAGTTCAATTCTAAAACTAAAACAACAAAAACTCCTATTAATACACTTCCCCTCCACAACAAACCATGGCATCGTCCAAAGAGACAGACTGTGCAGCAAGAACTAAGAGTGAATGACCAGCCAATGGCAGAACCAACAGATCATGAAGAAAGTCCAAACATAATCTCTGAAAATATTCTCAAGTGCTTATCAAGCATTCTTTTGAGAATGAGTACTGTCAAGTATCCGGATTCTACAGCTGGCATGTTGCGAGATCCGAAATCTCGAAACTGTACTAAAGAAACATGGTTTCAGGATCCATATGGTACATGTTTAGAATTTGGAGAGATGGATATTGGTCCGTACAAGCAATTCCGTGCAATTGAAGCTGAATCCTTCAGTCCAAAACGAACTGCTAATTCTTTGTTTCTGCAGCATCGATTGAAGCTTCTTTTGAGGAAACTTTCCTCTGTCAACTTAGAGAATCTCAATCATCAGGAGAAGCTTGCATTCTGGATCAACATATATAACTCTTGTATGATGAATGCATTCAATGAGCACGGCTTACCGGAGAGTCCCGAAACAGTTGTTGCATTGATGCACAAGACAACAATAAATGTGGGTGGACACTTGCTAAGCGCAACAACGATAGAGCATTGCATTCTAAGGCTTCCTTATCATTGGAAATTGCTGAATTCTAAACAGACATCAAAGGGAGCGAAGAATCATGAAATGACAGTAAGAAGCATATATGGATTGGAATTATCAGAACCCTTGGTGACATTTGCTCTCTCATGTGGAACTTGGTCCTCTCCTGCTGTCAGAGTTTACACAGCATCACAGGTCGAGAACCAACTCGAAGCAGCGAAAAGAGAATACTTGCAGGCTGCAGTTGGAATTTCAACTTCAAAGTTTGCTATCCCAAAGCTGCTAGATTGCTCCATTATGTTCCGTTTGATGGCTGTGGCCACCACAGCCGCTCCTTCCGAACCATTCAACTATCATATTTCAAAAGggccaattagttgtgggAGATCCTTGCTTGAGCAGCAGTTCAAATCTGAAGTTGCTTTGCTTTCACGTCTCTTTCACCCAAACATAGTTCAGTTTATTGCAGCTTGTAAAAAACCGCCAGTGTACTGTATCATAACAGAATACATGTCACAAGGAACTCTGAGGATGTATCTGAACAAGAAAGAGCCGTACTCTCTTTCAATTGAAACAATACTAAGGTTAGCTCTTGACATATCTAGGGGTATGGAGTACCTTCACTCGCAAGGCGTCATCCACAGAGATCTCAAGTCAAATAACCTTCTTCTCAATGATGAGATGAGGGTTAAGGTGGCAGATTTCGGCACATCTTGTCTCGAAACAAGGTGCCGGGAGACCAAAGGAAACATGGGAACGTATCGTTGGATGGCGCCAGAGATGATTAAGGAGAAACCTTACACTCGCAAAGTTGATGTGTATAGTTTTGGTATTGTGCTTTGGGAACTCACAACTGCTTTACTTCCCTTCCAAGGAATGACCCCTGTGCAAGCTGCTTTTGCTGTTGCTGAGAAGAATGAGAGGCCACCACTGCCGGCAAGTTGCCAGCCAGCACTAGCACACCTCATAAAGCGTTGCTGGGCGGCGAACCCATCGAAGAGGCCGGACTTCAGTGACATAGTGACCACTCTTGAGAAAACACCAAAAGTGTGGGCTTCGTTTAACTGGAATTACTTAAACCCAAAAGGCCGTATGCAGAATGCTAGCTATATTTTGTTTGGTTAG 2295 0.4349 MDTRRRVRLEPKKAQTGAHDDDHHHRVGPNLLNEKAEMRESLAQGKGRASSKERKLALQQDVERLKKKLRDEENIHRALQRAFNRPLGALPRLPPYLPPNTLGLLAEVAVLEEEIARLEEKVMHFRQDLYQEAVYTSSSKMKMDHSSRLVKLKSPSPTITLPEDRQGKENQSCSNSHKNTKQFNSKTKTTKTPINTLPLHNKPWHRPKRQTVQQELRVNDQPMAEPTDHEESPNIISENILKCLSSILLRMSTVKYPDSTAGMLRDPKSRNCTKETWFQDPYGTCLEFGEMDIGPYKQFRAIEAESFSPKRTANSLFLQHRLKLLLRKLSSVNLENLNHQEKLAFWINIYNSCMMNAFNEHGLPESPETVVALMHKTTINVGGHLLSATTIEHCILRLPYHWKLLNSKQTSKGAKNHEMTVRSIYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENQLEAAKREYLQAAVGISTSKFAIPKLLDCSIMFRLMAVATTAAPSEPFNYHISKGPISCGRSLLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVTTLEKTPKVWASFNWNYLNPKGRMQNASYILFG 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00338 764 SUPERFAMILY Protein kinase-like (PK-like) 521 734 IPR011009 -
Adu08g00338 764 PANTHER TRANSCRIPTION FACTOR 29 488 - -
Adu08g00338 764 ProSiteProfiles Protein kinase domain profile. 436 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00338 764 Pfam Protein of unknown function, DUF547 335 468 IPR006869 -
Adu08g00338 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Adu08g00338 764 PANTHER EXPRESSED PROTEIN 29 488 - -
Adu08g00338 764 Pfam Protein tyrosine and serine/threonine kinase 523 734 IPR001245 GO:0004672|GO:0006468
Adu08g00338 764 Pfam Leucine-zipper of ternary complex factor MIP1 51 132 IPR025757 -
Adu08g00338 764 Gene3D Transferase(Phosphotransferase) domain 1 509 751 - -
Adu08g00338 764 Coils Coil 101 128 - -
Adu08g00338 764 SMART serkin_6 449 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00338 764 MobiDBLite consensus disorder prediction 146 208 - -
Adu08g00338 764 MobiDBLite consensus disorder prediction 151 197 - -
Adu08g00338 764 PRINTS Tyrosine kinase catalytic domain signature 558 571 IPR001245 GO:0004672|GO:0006468
Adu08g00338 764 PRINTS Tyrosine kinase catalytic domain signature 661 683 IPR001245 GO:0004672|GO:0006468
Adu08g00338 764 PRINTS Tyrosine kinase catalytic domain signature 596 614 IPR001245 GO:0004672|GO:0006468
Adu08g00338 764 PRINTS Tyrosine kinase catalytic domain signature 642 652 IPR001245 GO:0004672|GO:0006468
Adu08g00338 764 PRINTS Tyrosine kinase catalytic domain signature 705 727 IPR001245 GO:0004672|GO:0006468
Adu08g00338 764 Coils Coil 48 82 - -
Adu08g00338 764 MobiDBLite consensus disorder prediction 1 34 - -
Adu08g00338 764 CDD STKc_MAP3K-like 522 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00338 Adu-Chr8 5936178 5943003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00338 519 736 MAP Kinase Kinase Kinase AT1G62400 94.954 6.74e-150 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Adu08g00338 PK_Tyr_Ser-Thr 1.9e-61 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00338 08 5936178 5943003 Adu08g00338 08 5936178 5943003 ECH
Adu06g03226 06 110575095 110579029 Adu08g00338 08 5936178 5943003 PCT