Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02191 ATGGCCCTGCAGATGACGTGGCAGCCGAACCTCCTGAGCCAAAAGCGCAAGAGCGGTCCTCCATTAGGTCTTCGCAACCTCGGCAATTCTTGCTACCTCAACAGCGTTCTCCAGTGCCTCACCTACACTCCCCCTCTCGCTAATTTCTGCCTCCGCTTCCAACACTCTTCCCTCTGTGATTCTTCTTCTTCTTCCTCCTCTAATTCGAATTCATCGAATTGTCCGTTCTGTATTCTCGAGAAGCAGATTGCGAAGTCCCTGCGCGTGGATCTCACGCACGACGCGCCGTTGAAGATTCAGAGCTGCCTCCGGATCTTCGCCGAGCACTTCCGGTGCGGCCGACAGGAGGACGCGCACGAGTTCCTGCGATACGTAATCGACGCCTGCCACAACACCTGCCTCCGCCTCAAGAAGCTCCGCCGCGGCGGAGATGGTGGTGCTGAGAACGGAGCCGGAGGTGGGAGCTCAACGGTGGTGAAGGAGATTTTCGGCGGTGCGCTGCAGAGCCAGGTGAAGTGCCTGTGCTGTGGTTATGAGTCGAATAAGGTCGATGAGATAATGGATATTAGCCTTGATGTTTTCCATAGTAACTCGCTTAGAGATTCAATGCAAAAGTTCTTCCGGCCTGAGGTTTTAGATGGGAACAATAAGTACAAATGTGATAGTTGTAAGAAATTAGTGCCGGCAAAGAAGCAGATGAGTATACTCCAAGCGCCTAATATTCTTGTTATACAGCTCAAGAGATTTGAGGGCATATTGGGGGGCAAGATTGATAAGGCTGTTGCATTTGAAGAGGTTTTGTTACTTTCTAGCTTCATGTGCAAAGCGAGTCAGGATCCACTACCAGAATATAAGCTTTTTGGTACTATTGTGCATTCAGGCTACTCCCCGGAGTCTGGTCACTATTATGCCTACATAAAGGATGCAATGGGTCGATGGTATTGTTGTGATGATTCTTGTGTAACAGTTGCAAGTTTGCAAGAAGTTTTGTCAGAGAAGGTTTATATTCTTTTTTTCTCTCGAACTACTCAAAGGCCAGCGTTAGTTAATGATTCTCTTGTTTCCAATGGCGTAAAGCCTCATCACTCGAATGGGAGTCAGGCATCTGAAAGTGCAAAGGTTGAGGCACCATTGAAAGCAGTGCATTCAAAATCAAATTCTGAGCAATCTACTTGGAAGGATATGCCAAGGGTATCTAAAATTAGTAAAGGGCCTTCTAGCTCAAGAGTGAAGTTTGACATTAATGGAAATTCTGCTTCCAAGAGAAGTCCTGCTCATGCAACTGTCAATGGGAAAGTGGACATTTCTAAGAATCAGCTTGTGGTAATTAATGGGCATGTGAAGGACACAGTTTCTTTGGAGAATGGTAAGAAAGATCCTCCGTCACTGCCAGCCAGGAATGGCTCTGTGAAAAATAAAGTTGACGTAGGTGATAGATTTAAAAGAAAGGATTCAGCATTAACAAATGGTTCCACTGATATTCATTCAGTTGATATGCATTTTGCCAAATCAGATCCAACGGTAGACAATAATAGAAGCACGGTAACAACAGGTAAGGGGCCAGAAAACTTTAAGCAAGAAAGCAATGGCCACGGTGAACCTAAAATATTGGGGAAGAGGAAAGTACAGGATACTTCAAGCATTTTGCTTGCACATGATGGTCAATCTCGAACAGAAGTTGAAGAGCTGAAAGACATTCTTGCAAAAGAAGCCAAGTCTGTTTTGAGGTCATGTGGCTGGACAGAAAACGTTTTTAACTTCATGCGATCTAGAAAGAGGTTACGAGCACAAGAAGCTGGTCATATAACAGGTGCAGACGAGATAAGGAGGTCATTAATAAGAGATGCGAAGGGAGCTTTCTTATCTAAGATTCCTGAGTCACTGAGGAAGGATCTGATTGAACGTCTCCGGTCGTTTAGCCAAGATAAATAG 1932 0.4545 MALQMTWQPNLLSQKRKSGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRFQHSSLCDSSSSSSSNSNSSNCPFCILEKQIAKSLRVDLTHDAPLKIQSCLRIFAEHFRCGRQEDAHEFLRYVIDACHNTCLRLKKLRRGGDGGAENGAGGGSSTVVKEIFGGALQSQVKCLCCGYESNKVDEIMDISLDVFHSNSLRDSMQKFFRPEVLDGNNKYKCDSCKKLVPAKKQMSILQAPNILVIQLKRFEGILGGKIDKAVAFEEVLLLSSFMCKASQDPLPEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTVASLQEVLSEKVYILFFSRTTQRPALVNDSLVSNGVKPHHSNGSQASESAKVEAPLKAVHSKSNSEQSTWKDMPRVSKISKGPSSSRVKFDINGNSASKRSPAHATVNGKVDISKNQLVVINGHVKDTVSLENGKKDPPSLPARNGSVKNKVDVGDRFKRKDSALTNGSTDIHSVDMHFAKSDPTVDNNRSTVTTGKGPENFKQESNGHGEPKILGKRKVQDTSSILLAHDGQSRTEVEELKDILAKEAKSVLRSCGWTENVFNFMRSRKRLRAQEAGHITGADEIRRSLIRDAKGAFLSKIPESLRKDLIERLRSFSQDK 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02191 643 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 17 15 398 - -
Adu07g02191 643 MobiDBLite consensus disorder prediction 382 425 - -
Adu07g02191 643 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 284 302 IPR018200 GO:0004843|GO:0006511
Adu07g02191 643 SUPERFAMILY Cysteine proteinases 18 347 IPR038765 -
Adu07g02191 643 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15 398 - -
Adu07g02191 643 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 22 342 IPR028889 -
Adu07g02191 643 MobiDBLite consensus disorder prediction 451 471 - -
Adu07g02191 643 MobiDBLite consensus disorder prediction 355 371 - -
Adu07g02191 643 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 23 38 IPR018200 GO:0004843|GO:0006511
Adu07g02191 643 Pfam Ubiquitin carboxyl-terminal hydrolase 23 339 IPR001394 GO:0004843|GO:0016579
Adu07g02191 643 MobiDBLite consensus disorder prediction 503 536 - -
Adu07g02191 643 CDD Peptidase_C19E 21 340 - -
Adu07g02191 643 MobiDBLite consensus disorder prediction 355 427 - -
Adu07g02191 643 Gene3D Cysteine proteinases 16 344 - -
Adu07g02191 643 MobiDBLite consensus disorder prediction 506 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02191 Adu-Chr7 72486725 72494119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02191 21 347 Miscellaneous Gene Families AT2G24640 37.273 4.49e-59 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02191 07 72486725 72494119 Adu07g02191 07 72486725 72494119 ECH