Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02171 ATGATGGTAGAGGACACGTTCTTGTTCCCGCCTGATACAGATCTTGATCTTAGTTTTACAAGCACCACCACTGACCGTACCTTCACCACCGCCTCCTCCTCCGCCCGCACCTCCCTAACACGCACCAGCAGTCTCACCCTCAGCTTCAGCTTCAACGACCGTCTCTCCGCGGCATCCGCCTCCGCTACAACCTCATCTGCCACCGTCCTCCGCCGTCCCCACCGCAGCTCCGACCCACACTGGTCCGCAATCCGCGCTGCTACCGCCCTCTCCTCCGACGGCCGCCTCCACCTCCGACATCTCAAGATCCTCGGCCATCTCGGCACCGGAAACCTTGGCCGCGTCTTCCTCTGCCGCCTCCGTGACGATCACCATGGCGGCGCCACCTTCGCCCTCAAGGTCGTTGACAAAGACCTCCTAAACGCCAAGAAACTCTCCCACGTAGAAACCGAGGCAGAAATCCTCCACGCGCTAGACCACCCTTTCCTTCCCACGCTCTACGCGCGCATCGATGCTTCTCACTACACTTGCCTCCTCATCGACTATTGCCCCAATGGAGACCTCCATTCCCTCCTCCGCAAACAGCCCGGCAACCGGCTCTCTATCCGGGCGGTCCGATTCTTCGCAGCGGAGGTTCTCGTCGCGCTCGAGTACCTCCATGCGCTAGGAATAGTTTACAGAGATCTCAAACCAGAGAACGTTCTGTTACGCGAGGACGGTCACGTCATGCTCTCGGATTTCGATCTCTGCTTTAAAGCTGACGTGGCACCTGTTTTCGAGCGTAGGTCACATTCCCCGAGACTAACAACAAACTCAAGAAACCGTTGTTTCTGTTATAACAACATTAGCAACAAATCTCGATTTACGGAGCACGTGGTGGCGGAGTTTGTTGCGGAACCAACAACGGCGTTTTCACGATCGTGTGTTGGGACCCACGAGTATCTCGCTCCAGAGCTTGTTTCTGGTAACGGTCATGGTAACGGCGTGGATTGGTGGGCTTTTGGGATTTTCATCTATGAACTTTTGTATGGTACGACGCCGTTTAAGGGGTATAGTAAAGAGAGTACGCTGCGCAATATAGCATCCAGCAGGGACGTGAGATTTTACATTAATGAGAGAGAGGAATTGGAGGAAGGGATAAGTGAAGCTAGGGATTTGATTGAGAAGCTTTTGGTGAAGGATCCGAGGAGGAGGCTAGGGTGCGCCAGAGGTGCAACGGATATTAAACGGCACCCGTTTTTTGATGGGATAAAGTGGCCGTTGATTCGGACGTACAAGGCACCGGAGGTGAGGGGGTTGGTGAAGAGGAGTAGGTCATTGCAGCACGTGACTAGTCACGTGACACATGGTAGAAGGAGAAAGTGGTGGTGGAAAGCGCTTGAGTGCAGGCACCAATGGCGGAGGATGATAATGATGGCAGAGGATAATAATGATGGCGAAGATGATAGTGACGGTGACAACGATGGTGATGACGATGCAGGTGATGTGGAAGGTGCGGATAGAACGGATATTCCAAATATTCATGGTAAATGGTATAATCTTAGGATTGACCTATGGTGGACGAAATTGTGA 1572 0.5331 MMVEDTFLFPPDTDLDLSFTSTTTDRTFTTASSSARTSLTRTSSLTLSFSFNDRLSAASASATTSSATVLRRPHRSSDPHWSAIRAATALSSDGRLHLRHLKILGHLGTGNLGRVFLCRLRDDHHGGATFALKVVDKDLLNAKKLSHVETEAEILHALDHPFLPTLYARIDASHYTCLLIDYCPNGDLHSLLRKQPGNRLSIRAVRFFAAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKADVAPVFERRSHSPRLTTNSRNRCFCYNNISNKSRFTEHVVAEFVAEPTTAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGIFIYELLYGTTPFKGYSKESTLRNIASSRDVRFYINEREELEEGISEARDLIEKLLVKDPRRRLGCARGATDIKRHPFFDGIKWPLIRTYKAPEVRGLVKRSRSLQHVTSHVTHGRRRKWWWKALECRHQWRRMIMMAEDNNDGEDDSDGDNDGDDDAGDVEGADRTDIPNIHGKWYNLRIDLWWTKL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02171 523 Gene3D Transferase(Phosphotransferase) domain 1 187 253 - -
Adu07g02171 523 Gene3D Transferase(Phosphotransferase) domain 1 305 433 - -
Adu07g02171 523 SMART serkin_6 101 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02171 523 PANTHER SERINE/THREONINE-PROTEIN KINASE WAG2 8 446 - -
Adu07g02171 523 Gene3D Phosphorylase Kinase; domain 1 434 446 - -
Adu07g02171 523 MobiDBLite consensus disorder prediction 475 501 - -
Adu07g02171 523 ProSiteProfiles Protein kinase domain profile. 101 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02171 523 Coils Coil 366 393 - -
Adu07g02171 523 MobiDBLite consensus disorder prediction 476 497 - -
Adu07g02171 523 Pfam Protein kinase domain 103 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02171 523 Pfam Protein kinase domain 302 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02171 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Adu07g02171 523 CDD STKc_phototropin_like 99 430 - -
Adu07g02171 523 PANTHER FLIPPASE KINASE 1-RELATED 8 446 - -
Adu07g02171 523 Gene3D Phosphorylase Kinase; domain 1 100 186 - -
Adu07g02171 523 SUPERFAMILY Protein kinase-like (PK-like) 80 436 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02171 Adu-Chr7 72037648 72041722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02171 12 460 AGC Kinase Gene Family AT1G53700 68.584 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Adu07g02171 Pkinase 1.2e-32 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02171 07 72037648 72041722 Adu07g02171 07 72037648 72041722 ECH