Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02145 ATGGCTTCACTGCTGAACACAGTGTCCCCTGCTGCGAATTTTCATGCAAAAGCAAAAAGAAATGCTCCTGGTTTCTTCCATTCCCATGCCCCAAATTTCCATTCTTTGTCGCTTAACAAGGGTTTTTCCAGAGTTTTGGCATCAACCCAAGTCACAGTTTCCCCAAAAGATGCTGTTTTCACACTTCCCAATTGGAGGGTTGGGAAGAGTGACCAGAAGAGTAAGGAGCTTAGGATGAACGATGCATTTCTTCAGTTGGAATATATGGTGGAGAAGGGACACAAGCCTGATGTAATTCAAGTAACGCAGCTTTTGTATGATCTTTGCAAGGCAAATAAGTCTAGGAAAGCTGTTAGGGTGATGGAGATGACAGTAGGTTCCGGCGTTATACCTGATGCGTCTTCGTACACATTCTTGGTGAATTATTTGTGCAAGAGAGGGAATGTTGGCTATGCAATGCAGTTGGTTGAGAAAATGGAGGCACATGGTTTTCCAACTAATACTGTTACTTATAACACGCTGGTTAAAGGGCTTTGTATGCATGGGAATTTGAACCAAAGCTTGCAGCTTTTGGATCGGCTAATCAAGAAGGGGCTGGTGCCAAATGCATTCACGTATTGTTCCTTGCTCGAAGCTGCTTATAAGGAACGGGGAGTAGACAAAGCCATGAATCTCCTAGATGAGATAATTGCCAAGGGTGGAGAGCTTAATTTGGTTAGTTACAATGTTTTGTTAACTGGATTGTGCAAGGAAGGTAGAATTGAAGAAGCTATTCGGTTCTTTCGGGAGTTTCCTGCAAAAGGATTAAGTCCGAGTGTTGTGAGTTATAACATTTTGCTAAGGAGTTTGTGCTATGATGGGCGATGGCAGGAGGCGAATGAGCTTTTGGCAGAGATGGTTAAAGAAGGCCAGTCTCCCTCGGTAGTTACTTATAACATATTAATCACTTCTCTTTCGCTCCGGGGGAAAACAGAACAAGCTTTCGAAGTTTTAGATGAAATGATACGGAGTGGATTCAAGATGACGGCTACAAGCTATAATCCGATTATTTCCCGTCTATGCAAGGAAGGGAAAGTGGATCTTGTAGTTCAGTGTCTAGACCAAATGATTTATCGACGTTGTCAACCTAATGAAGGTACATACAATGCTATTGCGACACTCTGTGAGGAGGGGAAGGTGCAGGAGGCATTCTTTATAATTCAAAGCTTGGGTAATAAACAAAACTACACTATGCATGAGTTTTACAAAACTGTGATTTCAAGCCTGTGTAGGAAAGGGAACACATATCCAGCTTTTCAAATGTTATATGAAATGACAAAGTATGGATTCGTATCAGATTCCTATACGTATTCATCTTTGGTAAGAGGAATGTGTAGGGAGGGAATGCTAGACGGGGCCATTGAGATATTTAGGATCTTGGAGGAAAATGGCTATACTCCTGATGTTGATAACTACAATGCACTTATACTTGGATTTTGCAAATCTCGAAGAACAGACACGGCAATGCAGATAGTTCAGATGATGATCAATAAAGGATGTGTGCCTAATGAGACAACCTATACCATTATTGTTGAAGGGCTCGCTTTCGATGGAGAAATGGATATGGCAGCGGAGATTTCGAAAGCATTATATTTGAAAGAAGCTCTGAGCCAAAGCACTTTTGAAAGACTTTCTATGCAGTATGACTTCAAGGAATGA 1698 0.4158 MASLLNTVSPAANFHAKAKRNAPGFFHSHAPNFHSLSLNKGFSRVLASTQVTVSPKDAVFTLPNWRVGKSDQKSKELRMNDAFLQLEYMVEKGHKPDVIQVTQLLYDLCKANKSRKAVRVMEMTVGSGVIPDASSYTFLVNYLCKRGNVGYAMQLVEKMEAHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLIKKGLVPNAFTYCSLLEAAYKERGVDKAMNLLDEIIAKGGELNLVSYNVLLTGLCKEGRIEEAIRFFREFPAKGLSPSVVSYNILLRSLCYDGRWQEANELLAEMVKEGQSPSVVTYNILITSLSLRGKTEQAFEVLDEMIRSGFKMTATSYNPIISRLCKEGKVDLVVQCLDQMIYRRCQPNEGTYNAIATLCEEGKVQEAFFIIQSLGNKQNYTMHEFYKTVISSLCRKGNTYPAFQMLYEMTKYGFVSDSYTYSSLVRGMCREGMLDGAIEIFRILEENGYTPDVDNYNALILGFCKSRRTDTAMQIVQMMINKGCVPNETTYTIIVEGLAFDGEMDMAAEISKALYLKEALSQSTFERLSMQYDFKE 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02145 565 SUPERFAMILY TPR-like 144 399 IPR011990 GO:0005515
Adu07g02145 565 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 307 341 IPR002885 -
Adu07g02145 565 Gene3D Tetratricopeptide repeat domain 411 473 IPR011990 GO:0005515
Adu07g02145 565 Gene3D Tetratricopeptide repeat domain 196 266 IPR011990 GO:0005515
Adu07g02145 565 Gene3D Tetratricopeptide repeat domain 267 336 IPR011990 GO:0005515
Adu07g02145 565 Gene3D Tetratricopeptide repeat domain 337 407 IPR011990 GO:0005515
Adu07g02145 565 Gene3D Tetratricopeptide repeat domain 474 544 IPR011990 GO:0005515
Adu07g02145 565 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 167 201 IPR002885 -
Adu07g02145 565 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 272 306 IPR002885 -
Adu07g02145 565 Pfam PPR repeat 128 160 IPR002885 -
Adu07g02145 565 Pfam PPR repeat 232 263 IPR002885 -
Adu07g02145 565 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 564 - -
Adu07g02145 565 TIGRFAM PPR: pentatricopeptide repeat domain 169 203 IPR002885 -
Adu07g02145 565 TIGRFAM PPR: pentatricopeptide repeat domain 415 446 IPR002885 -
Adu07g02145 565 TIGRFAM PPR: pentatricopeptide repeat domain 345 378 IPR002885 -
Adu07g02145 565 TIGRFAM PPR: pentatricopeptide repeat domain 485 517 IPR002885 -
Adu07g02145 565 TIGRFAM PPR: pentatricopeptide repeat domain 309 342 IPR002885 -
Adu07g02145 565 TIGRFAM PPR: pentatricopeptide repeat domain 448 482 IPR002885 -
Adu07g02145 565 TIGRFAM PPR: pentatricopeptide repeat domain 135 166 IPR002885 -
Adu07g02145 565 TIGRFAM PPR: pentatricopeptide repeat domain 239 272 IPR002885 -
Adu07g02145 565 TIGRFAM PPR: pentatricopeptide repeat domain 274 307 IPR002885 -
Adu07g02145 565 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 202 236 IPR002885 -
Adu07g02145 565 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 446 480 IPR002885 -
Adu07g02145 565 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 481 515 IPR002885 -
Adu07g02145 565 Pfam PPR repeat family 344 385 IPR002885 -
Adu07g02145 565 Pfam PPR repeat family 415 459 IPR002885 -
Adu07g02145 565 Pfam PPR repeat family 480 528 IPR002885 -
Adu07g02145 565 Pfam PPR repeat family 271 318 IPR002885 -
Adu07g02145 565 Pfam PPR repeat family 167 212 IPR002885 -
Adu07g02145 565 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 237 271 IPR002885 -
Adu07g02145 565 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 564 - -
Adu07g02145 565 Gene3D Tetratricopeptide repeat domain 39 195 IPR011990 GO:0005515
Adu07g02145 565 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 132 166 IPR002885 -
Adu07g02145 565 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 342 376 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02145 76 561 Glycosyltransferase AT1G05670 24.494 7.82e-44 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02145 07 71009444 71011832 Adu07g02145 07 71009444 71011832 ECH