Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00986 ATGATAATGGAGGCATTGGACGGACTCAATGAACCAAATGGATCCAACAAATCAGCCATATCGAGGTACATAGAGTCCACTTATGGAGAATTACCAGAGGGACACACAACACTCCTCAATCACCACCTCAACAAGATGAAAGACAGTGGGGAGCTTGTGTTCTTGAAGAACAACTACATGAAACCTGATGGTAGTCCGCCACCAAAAAGAGGCCGTGGAAGGCCGCCGAAGGCAAAGGAGCCACTTCCTCCGGGAACTGTTTTGTCATCCCCAAGGCCAAGGGGAAGGCCACCAAAGGATCCAAATGCACCACCAAAGTCACCGAAAGCAAAGCCTTCAGGTGGAAGTGGTAGGCCTAGAGGAAGGCCTAAGAAGATTCCCCGGACAGCGGCGCCGCCTCCACCGTCGCCGTTGAGTGCTCCTTCTACCCCTAGGGGTAGGGGTAGGCCTCCAAAGGTGAAGCCTCAATTGACAGAAGTGAGTGTTGAGATATAG 495 0.5192 MIMEALDGLNEPNGSNKSAISRYIESTYGELPEGHTTLLNHHLNKMKDSGELVFLKNNYMKPDGSPPPKRGRGRPPKAKEPLPPGTVLSSPRPRGRPPKDPNAPPKSPKAKPSGGSGRPRGRPKKIPRTAAPPPPSPLSAPSTPRGRGRPPKVKPQLTEVSVEI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00986 164 PRINTS AT-hook-like domain signature 89 100 IPR017956 GO:0003677
Adu07g00986 164 PRINTS AT-hook-like domain signature 69 79 IPR017956 GO:0003677
Adu07g00986 164 PRINTS AT-hook-like domain signature 115 125 IPR017956 GO:0003677
Adu07g00986 164 MobiDBLite consensus disorder prediction 126 141 - -
Adu07g00986 164 Pfam AT hook motif 144 155 IPR017956 GO:0003677
Adu07g00986 164 Pfam AT hook motif 91 102 IPR017956 GO:0003677
Adu07g00986 164 Pfam AT hook motif 69 80 IPR017956 GO:0003677
Adu07g00986 164 Pfam AT hook motif 117 126 IPR017956 GO:0003677
Adu07g00986 164 SMART AT_hook_2 69 81 IPR017956 GO:0003677
Adu07g00986 164 SMART AT_hook_2 117 129 IPR017956 GO:0003677
Adu07g00986 164 SMART AT_hook_2 91 103 IPR017956 GO:0003677
Adu07g00986 164 SMART AT_hook_2 144 156 IPR017956 GO:0003677
Adu07g00986 164 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 1 63 IPR005818 GO:0000786|GO:0003677|GO:0006334
Adu07g00986 164 SMART h15plus2 1 58 IPR005818 GO:0000786|GO:0003677|GO:0006334
Adu07g00986 164 MobiDBLite consensus disorder prediction 78 108 - -
Adu07g00986 164 SUPERFAMILY "Winged helix" DNA-binding domain 1 70 IPR036390 -
Adu07g00986 164 PANTHER HMG-Y-RELATED PROTEIN A 1 160 IPR031059 GO:0003677|GO:0005634
Adu07g00986 164 Gene3D - 1 78 IPR036388 -
Adu07g00986 164 PANTHER HISTONE H1 1 160 - -
Adu07g00986 164 PRINTS High mobility group protein (HMGY) signature 67 79 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Adu07g00986 164 PRINTS High mobility group protein (HMGY) signature 106 125 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Adu07g00986 164 PRINTS High mobility group protein (HMGY) signature 93 104 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Adu07g00986 164 Pfam linker histone H1 and H5 family 1 57 IPR005818 GO:0000786|GO:0003677|GO:0006334
Adu07g00986 164 MobiDBLite consensus disorder prediction 54 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00986 Adu-Chr7 13416233 13418112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00986 1 66 Single Myb Histone (SMH) Gene Family AT1G49950 39.394 1.42e-06 45.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00986 07 13416233 13418112 Adu07g00986 07 13416233 13418112 ECH