Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00978 ATGATAACCGACGATAATATATTCGCGGGTTCTTCATCCTATGAACCATTTTCAATGTCCGGTGGTAATTGCATGGACGAATTGCTAGCAGCTATAGGCTACAAGAAGTTGCGATCAAAGGACAACATGGCTGACGTGGGCCAGAAGCTGGACCAGCAGCTCGAAGCGGTGATGATGGATAATAATGTCAATGCACGCGAAGACGGTACCTCTTCCAACGTCGCTTCAGACGACGCCGTCGTTCACTACGATGACCCCAACGATGTCTTCCCCTGGGAAAAAACCATGCTCACCCCCACGACCACCCACAACAATAACCAAAACGACACCACAATCTCCAATTCACTGCCGTTTACGCAAATCCTGGAGGACCCTCTACGGTTCAACATTCTCAACGGAAACTCAGCCAAGGACAACGATCTTACAGCGGTTACCGAAACCGTAAAATCGCAAGTGGAGCAACATTCAGACCTCACGTGTCTTTGTGTGGCGGTCGAAGACACTGGCGTGCGACTCGTCCACGCGCTGATGGCGTGCGCGCAGGCGATCCAGGAAGGGAAGCTTGACCTCGCTGACGTGCTCGTGAACCACGCGTCGGTCCTCGCGTCGCAGCAGGGCGGTGCGATGAGGAAAGTCGCCGCCAACTTCTCTCACGCGTTGGCGCGTCGAATCTACGGCGCGTTCCCGGAAGAGTCCATGAGCTCCTCGCTCTCCGACATGCTCCACGTCCACTTCTACGAGACTTGCCCGTACCTCAAATTTGCGCACTTCACCGCCAACCAAGCGATTCTAGAAGCTTTCTCCTCCGCAACCGCCGTCCACGTCATCGATTTCGGCCTGAAGCAGGGGCTTCAGTGGCCCGCGCTCATGCAGGCCCTGGCACTCCGTCCCGGAGGACCACCATCCTTCCGGTTAACCGGAATCGGACCGACATCGCCAGAGGACACCGACACTCTTCAACAAGTCGGTTGGAGGCTTTCGCAGCTTGCGAGAACGATTCAGGTTCGGTTCGAGTTCCGGGGATTCGGCTGTAACAGCCTCTCGGATCTTGATCCAACGGCTCTTGATATCAAACCAGGAGAATCCGTCGCCGTTAACGCCGTCTTTGAGCTTCACCGTATGCTCGCCAAGCCCGGTTCGCTTGAGAGGGTTTTGAACACAGTAAAAAATATCGAACCGGAGATAGTGACGGTGGTGGAGCAGGAAGCGAACCATAACGGTCCTGTGTTTTTTGAACGGTTCACGGAGGCGATGCATTATTACTCGAGTTTGTTTGATTCGATGGAAGGATCGGTAAATGAGGATGGGACTCTTTCGGAGGTTTACTTAGGGAGGCAGATATGCAACGTTGTGGCGTGCGAAGGAGAGGACCGAGAACGACGGGTGTCTCTTGCTCGGTTGGCAAATGAGGCCACTCGTTGCTACATCCGCGTGGAGAGTCGCCAGCGGCGCCCGCCGCCATTGAGTGAGCGAGCTAACGAGTTGACTGACTCGGTGGTTTCTCGGAATCGGTGA 1515 0.5485 MITDDNIFAGSSSYEPFSMSGGNCMDELLAAIGYKKLRSKDNMADVGQKLDQQLEAVMMDNNVNAREDGTSSNVASDDAVVHYDDPNDVFPWEKTMLTPTTTHNNNQNDTTISNSLPFTQILEDPLRFNILNGNSAKDNDLTAVTETVKSQVEQHSDLTCLCVAVEDTGVRLVHALMACAQAIQEGKLDLADVLVNHASVLASQQGGAMRKVAANFSHALARRIYGAFPEESMSSSLSDMLHVHFYETCPYLKFAHFTANQAILEAFSSATAVHVIDFGLKQGLQWPALMQALALRPGGPPSFRLTGIGPTSPEDTDTLQQVGWRLSQLARTIQVRFEFRGFGCNSLSDLDPTALDIKPGESVAVNAVFELHRMLAKPGSLERVLNTVKNIEPEIVTVVEQEANHNGPVFFERFTEAMHYYSSLFDSMEGSVNEDGTLSEVYLGRQICNVVACEGEDRERRVSLARLANEATRCYIRVESRQRRPPPLSERANELTDSVVSRNR 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00978 504 ProSiteProfiles GRAS family profile. 163 504 IPR005202 -
Adu07g00978 504 Pfam Transcriptional regulator DELLA protein N terminal 26 98 IPR021914 -
Adu07g00978 504 SMART DELLA_2 26 110 - -
Adu07g00978 504 Gene3D - 24 99 IPR038088 -
Adu07g00978 504 PANTHER DELLA PROTEIN RGL1 25 469 IPR030006 GO:0003712|GO:0005634
Adu07g00978 504 Pfam GRAS domain family 172 462 IPR005202 -
Adu07g00978 504 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 469 IPR005202 -
Adu07g00978 504 MobiDBLite consensus disorder prediction 480 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00978 Adu-Chr7 13297833 13299462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00978 25 469 GRAS Transcription Factor Family AT1G66350 51.885 2.75e-151 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu07g00978 GRAS 2.9e-103 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00978 07 13297833 13299462 Adu07g00978 07 13297833 13299462 ECH