Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03315 ATGTTTTCAGATTCTAACATTTTCCAACATAGGACTGTTGGAATTGGACCATTCCATATAATACTCTTTCCTCAAACAGAGATTACAAGACAGAACAGAGCAGAATCACCAGAGCTTGTAATTGGAGGTGCAGAATCAAGCTTCGAATTGAAGAGAAACAGAGCAAAGAACAACATGAAGGTGAAGAAGTTAAAGAGTTCCTCTGTTTTGTCAGCTACAGTTGTTTTTACCGTTATGAACCTGTTCTTCTTCGTTGAGTTCAGTTCTGCTTTGAGTTCAAGCACTGAAAAGTTGAGTTCAAGAACCGAATGGTTTTCGTTGCTTCAACTTCGATCTTCATTGGGTATAAGAGCAAAAAACTGGCCAAGAAAAACAGAACCGTGCTGGAACTGGACCGGGATTCATTGCCAAAAGGGTTCAGTTATCGGAATCAACATTTCCGGTTTCAGAAGAACACATAAAGCTAGTCTTCACCCAAGTTTCTCAGTTGATGCACTTGCCAATTTTACCCGTTTAGCTTCCTTCAATGCTTCAGGTTTTGTGCTTAATGGTTCTATTCCTGAGTGGTTTGGTGACAAAAGCAATAACAACTACCTTGGTGCACTCCAGGTGCTTGATTTAAGTTCTTGCTCAATAACTGGCTCTATTCCTGAGTCAATTGGTGGTTTGATTTTGTTGAAGTCTGTGTTACTTTCTGGGAATAGCTTAACTGGTAGAATGCCTTCAGGTTTGGGAATGTTGTCTAATTTATCTGTGCTTGATCTCTCAGGAAATGAACTTTCTGGGTCTATTCCTGATTCATTGTTTTCACTTGGTAACCTCACACGTCTTAATCTTTCTTCCAATTACTTATCTGGGAATGTTCCGAATCAACTTAGTAACCTTTCAGGGCTTGAAGCTTTGGACCTTTCCAACAATGCACTAACTGGTAATGTGCCTAGTGTCTTGTTTTCTCGCCTTTCGAAACTTCGAGTTCTCAATTTGAGTGGTAACTTTATTGATGGTGATCTTCCTGATACTTTGTGGTCATTACCGAGCTTGCGTTTCGTTGATGTGTCCAACAACAACCTTACCGGTCCTCTACCGAAGGTTTTCGGTTCAAATACTAGTTCTACTGATGCCACATTCAATCTCTCAAACAACTTATTCTTTGGAACTCTAAATATTTCGGCTAAGAAGTTTAGAATGATTGATCTATCCGGTAATTATTTGGAAGGCGAGGTGCAAGGTGTTAGTCTTAGTAATGTTAGTTTAGCTAGGAATTGCCTGGAGGATGTTCCAAATCAGAGGGATGTTAGTGTTTGTAGAGTGTTTTATGAGAAGAGAAATTTACCCTTTCCATCAAATTCGACAATGGAAAAATCTTCCAGAAAGAAACTGATATTCATACTGGTAGGTGTATTTGGTGGACTTGGCTTTATTTTGCTTCTGGCATTGGTCCTCGTACTGTTCTTAAAACTATGTGGCAATCATAAAAGCTTGGAAGTTCAAAGGGGAATTGAAAGTGGAGGGCCTGTTCCAGTAGGGGAGAGTCCTATGCCGCCTAAAGACCTTGCATTCGACATTGCTGTCGGGGAATCATTTACTTATGAGCAAATTCTCAAGTTGACTGGTAATTTTGCTGAAGCAAATATCATCAAGCATGGTCATTCTGGAGACCTCTTCTGGGGAGTAATGGAAAACGGAGCTACTGTCGTCATCAAAAAGGTAGATTTGAGTTTGTTCAAGAGAGAATCATATGTTGTGGAGTTGGAATTATTAAGCAAGGTTTCACATGCAAGATTGATCCCAATCTTGGGACATTGCTTGGAGAATGACAATGAGAAATGTATAGTTTACAAGTATATGCCAAATGGAGATTTGGCAAGTTCTTTGCAGAGAGTCACTGATGCAGATGGTAAATCGAAGTCCCTTGATTGGATCACAAGATTGAAAATCGCTACAGGAGCTGCCGAAGGCCTTGCTTATCTACACGATAGCAGTCCTCCCCTCGCTCACAGAGATGTTCAAGCTAGCAGCATACTTCTTGATGATAAATTTGAGGTGCGACTTGGAAGTTTGAGTGAGGTTACCACCCAAGGAGATGTCCATCCTGGTGTCATGAACAGGCTGTTCAGCAAGCCATCGTAA 2130 0.4061 MFSDSNIFQHRTVGIGPFHIILFPQTEITRQNRAESPELVIGGAESSFELKRNRAKNNMKVKKLKSSSVLSATVVFTVMNLFFFVEFSSALSSSTEKLSSRTEWFSLLQLRSSLGIRAKNWPRKTEPCWNWTGIHCQKGSVIGINISGFRRTHKASLHPSFSVDALANFTRLASFNASGFVLNGSIPEWFGDKSNNNYLGALQVLDLSSCSITGSIPESIGGLILLKSVLLSGNSLTGRMPSGLGMLSNLSVLDLSGNELSGSIPDSLFSLGNLTRLNLSSNYLSGNVPNQLSNLSGLEALDLSNNALTGNVPSVLFSRLSKLRVLNLSGNFIDGDLPDTLWSLPSLRFVDVSNNNLTGPLPKVFGSNTSSTDATFNLSNNLFFGTLNISAKKFRMIDLSGNYLEGEVQGVSLSNVSLARNCLEDVPNQRDVSVCRVFYEKRNLPFPSNSTMEKSSRKKLIFILVGVFGGLGFILLLALVLVLFLKLCGNHKSLEVQRGIESGGPVPVGESPMPPKDLAFDIAVGESFTYEQILKLTGNFAEANIIKHGHSGDLFWGVMENGATVVIKKVDLSLFKRESYVVELELLSKVSHARLIPILGHCLENDNEKCIVYKYMPNGDLASSLQRVTDADGKSKSLDWITRLKIATGAAEGLAYLHDSSPPLAHRDVQASSILLDDKFEVRLGSLSEVTTQGDVHPGVMNRLFSKPS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03315 709 SMART LRR_typ_2 199 223 IPR003591 -
Adu06g03315 709 SMART LRR_typ_2 344 367 IPR003591 -
Adu06g03315 709 SMART LRR_typ_2 295 319 IPR003591 -
Adu06g03315 709 SMART LRR_typ_2 320 343 IPR003591 -
Adu06g03315 709 SMART LRR_typ_2 247 271 IPR003591 -
Adu06g03315 709 Gene3D Ribonuclease Inhibitor 101 263 IPR032675 -
Adu06g03315 709 SMART tyrkin_6 540 709 IPR020635 GO:0004713|GO:0006468
Adu06g03315 709 SUPERFAMILY Protein kinase-like (PK-like) 522 685 IPR011009 -
Adu06g03315 709 Pfam Leucine rich repeat 248 308 IPR001611 GO:0005515
Adu06g03315 709 Pfam Leucine rich repeat 311 357 IPR001611 GO:0005515
Adu06g03315 709 Pfam Protein tyrosine and serine/threonine kinase 546 685 IPR001245 GO:0004672|GO:0006468
Adu06g03315 709 Gene3D Phosphorylase Kinase; domain 1 518 615 - -
Adu06g03315 709 Gene3D Ribonuclease Inhibitor 318 436 IPR032675 -
Adu06g03315 709 ProSiteProfiles Leucine-rich repeat profile. 249 271 IPR001611 GO:0005515
Adu06g03315 709 PRINTS Leucine-rich repeat signature 295 308 - -
Adu06g03315 709 PRINTS Leucine-rich repeat signature 250 263 - -
Adu06g03315 709 PANTHER RECEPTOR-LIKE PROTEIN 55 78 708 - -
Adu06g03315 709 Gene3D Transferase(Phosphotransferase) domain 1 616 696 - -
Adu06g03315 709 Gene3D Ribonuclease Inhibitor 264 317 IPR032675 -
Adu06g03315 709 SUPERFAMILY RNI-like 163 425 - -
Adu06g03315 709 ProSiteProfiles Protein kinase domain profile. 540 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g03315 709 Pfam Leucine Rich Repeat 202 223 IPR001611 GO:0005515
Adu06g03315 709 PANTHER BNAA07G03560D PROTEIN 78 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03315 Adu-Chr6 111622681 111629196 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Adu06g03315 PK_Tyr_Ser-Thr 1.4e-16 CL0016