Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03271 ATGAAATATCTTGTGTATCTAATCATTTTCTTCTCACTCAGACTATGCTCGGCACAACAAAACTACTCAGGAAACTCAATACTAAGATGCAACAATGATGACAAAAAGGGACCTTCACCATCATTCCTCTACACATGCAATAACAATGGCATCAAGAAATCATCATCATGCATGGCATTCTTAATCTTCAAATCTCAACCTCCTTACAACACCATCACCACAATCTCCAACCTCACTTCTTCAAACCCAATAGACCTTGCAAGAATCAATGATGTCACTACTTCACACACAATGTTCCAAATTGGTAAAGAGGTTATTGTCCCTTTGAAATGCTCTTGTTCTTCAATGAAGGACACCAAGTATTACTATTACCAATCCAAAACCAAACATGTCTTGGGTGCAATTTTGCCAGAAACAACATATTTCAATGTTGCAAATGAAACTTTCCAAGGCTTAACCACTTGTGATTCCCTAAAGAGGTTCAATCCTTATCCGGAGCGCGATTTGCGCCCCGGCATGGAGTTGAATGTTCCATTAAGGTGTGCTTGTCCAACATGGAATCAAGAAAGAAATGGCACCAAGTATTTGATGACTTATTCTGTGAATTGGGGTGACACCATTTCTAGCATTGCATCAAGATTCAATGCAACAATACATAATCTTCTTGAAGCCAATGGTATTTCCATGGAAACTACAATTTTTCCATTCACAACTCTTCTGATTCCTTTGCCAAGTGAACCACTGAGTTCATCAACAATCACAGTTGCCAATGATCCACCATATGATTCTACTTCACTGCATGCCAAAACCGGTTCCAAAGGGATCGAGTTAAAGAAACTAGTAATAATCAATATAGTTCTTGCTGCTATATTGATTCTGAGCATCATGTTATCTCTAGTGTTTTTGATAGGAAAGATATCAAAAAGATTCATCAAGGCAGGCAAAATCCATAAGAGAAATGGCGTGATTTCAGAAGATATCCGCGTCGAAATAGCGAGCATTGATGTGAACTATTCCAAATTGTACAAGTTTGAGGAAATCAAGGATGCTACCGAAAATTTCAGTTCAAGGAACAGAATCAAAGGTTCTGTATTTCACGGCGAATTCGGTAACAAAAGGGAAAGTTTTGCTGTCAAAAGAAGAATAAGTAAAGGGTATGCTTCAAAGGAAATAAATTTGCGTAGAAGAATCAACCATTTCAACTTGATCAAGCTTCAAGGATATTGTGAAAATGAAGATTTGTTCTATCTTGTGTTTGAATTCATGGAAAATGGTTCCTTAAGAGAATGGCTTAGTAGTGAAGAAAACTCATTTTTGCATAAAAGTTGGTCAAAGAGGATTCAAATTGCTTTGGATATTGCAAATGGACTTCAATATCTTCACAACTTCACATATCCTTGTTATGTTCACCATGGTATTAACACTGGAAACATTCTTCTAAACAAAGATCTAAGGGCAAAGATAGCAAATTTTTCTCTAGCAGAAGAATTATTAGAAAAGAGCATGATAACAAGTTCAAGTTCTTCTCGCACTTCAGATGATGTTTATGCCTTTGGAGTGGTACTTTTGGAATTGATCACTGGCAAAGAATGTGTTACACTACATGGTTTATCAAGAGAAGGAATAATAATGGTTTCTAGGATCATGATGAATAATCTCATTGGTAAGGAGCATGAAGAAGAAGAGAAGTTGAGTTTGTTCTTTGATCCAAGGCTCATTGGAAACATTGAGAGAAAAAGTGCTTTGATGCTAGTTAAGCTAAGTTTAGGTTGCTTGAATCAAGAATCAGAAAGTAGACCAAACATGTCAGAGGTGGTCTCTACCTTGTGGAAAACACTTTCTGAGTCCCATAATAATTGTTGGAGTGAGAAAATTGTCATGTTGAAATGTTAA 1893 0.3661 MKYLVYLIIFFSLRLCSAQQNYSGNSILRCNNDDKKGPSPSFLYTCNNNGIKKSSSCMAFLIFKSQPPYNTITTISNLTSSNPIDLARINDVTTSHTMFQIGKEVIVPLKCSCSSMKDTKYYYYQSKTKHVLGAILPETTYFNVANETFQGLTTCDSLKRFNPYPERDLRPGMELNVPLRCACPTWNQERNGTKYLMTYSVNWGDTISSIASRFNATIHNLLEANGISMETTIFPFTTLLIPLPSEPLSSSTITVANDPPYDSTSLHAKTGSKGIELKKLVIINIVLAAILILSIMLSLVFLIGKISKRFIKAGKIHKRNGVISEDIRVEIASIDVNYSKLYKFEEIKDATENFSSRNRIKGSVFHGEFGNKRESFAVKRRISKGYASKEINLRRRINHFNLIKLQGYCENEDLFYLVFEFMENGSLREWLSSEENSFLHKSWSKRIQIALDIANGLQYLHNFTYPCYVHHGINTGNILLNKDLRAKIANFSLAEELLEKSMITSSSSSRTSDDVYAFGVVLLELITGKECVTLHGLSREGIIMVSRIMMNNLIGKEHEEEEKLSLFFDPRLIGNIERKSALMLVKLSLGCLNQESESRPNMSEVVSTLWKTLSESHNNCWSEKIVMLKC 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03271 630 Gene3D LysM domain 196 254 IPR036779 -
Adu06g03271 630 Pfam Protein kinase domain 368 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g03271 630 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 6 615 - -
Adu06g03271 630 Gene3D Phosphorylase Kinase; domain 1 326 421 - -
Adu06g03271 630 SUPERFAMILY LysM domain 197 243 IPR036779 -
Adu06g03271 630 CDD LysM 198 241 IPR018392 -
Adu06g03271 630 ProSiteProfiles LysM domain profile. 197 241 IPR018392 -
Adu06g03271 630 Gene3D Transferase(Phosphotransferase) domain 1 422 626 - -
Adu06g03271 630 ProSiteProfiles Protein kinase domain profile. 297 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g03271 630 SUPERFAMILY Protein kinase-like (PK-like) 344 619 IPR011009 -
Adu06g03271 630 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 6 615 - -
Adu06g03271 630 SMART LysM_2 198 242 IPR018392 -
Adu06g03271 630 Pfam LysM domain 199 242 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03271 Adu-Chr6 111150072 111152679 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Adu06g03271 Pkinase 7.8e-22 CL0016