Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03270 ATGAGTTTCATTCATAACCAAGCTTCTCCAACTCACATAGGAATAAGAACGGTGGAAGCTGAAAATGTTTGCAACTTTTCAACTCATTCGGATCTATGTATCTCCATAGCAACTTGGAATATGAATGGCCAGGTTTCGTTTGAAGAGCTGGCAGATATGGTTGGTAGCAACCGAGAATTTGAACTTTTAGCAGTTGGATTGCAAGAAGCTCCAAAAGAAAGAAAAGTTGCAACACTCCTCAAAGAAGCTCTACATGAAAATTATTTGAACTATAACTCACTAGACACACATAACATGATAGGCAAAGTAATAATGGGATCTTTGCAGCTCTACCTATTTGGGCCATCAAATGCAAAAAGATCTTCCATTACAGAATTGAAGATGGACAAACAGTCAATTGGGGGATTTGGAGGAATAATTGGAAGAAAGAAAGGAGCTGTTGCAATCCGAATTAACTACAAAGGCATTAGAATTGTTTTCATCTCTTGCCATCTCTCTGCTCATGCAAGCAAGGTAGAGGAAAGAAATTGTGAATGTAGGCACATATCACACTCTCTATTCTCTAAGAATTGGAATCCATATTCAAGACCATCACATATTACTATTTGGTTGGGAGATTTAAACTACAGGCTTCAAGGCATTGATACTTATCCAGCCAGAAATCTTATCAACAATGACCTTCATCAGAGGCTGCATGGAAAAGATCAGCTTTTACAAGAAGCTGGGCGTGGACAAATATTCAATGGCTTCTGTGAGGGAACATTGACATTTAAGCCTACTTATAAATACAACAAAGGAAGTAGCAACTATGATACAAGTTACAAGGTTCGAGTGCCAGCATGGACCGATCGCATATTATTCAAAATAGAAGATGAAAGTGACATTGAAGCAACTTTACATTCTTATGAATCCATGGATGAAATTAATGGTTCTGATCATAAACCTAAAGAGGAAGGAATTTGCTCCGACCAAAAGATTTCGGAAGGGCATTACCATTCGTATTATAACGGGGATGCGGATTCTTACTTGCCATCGACGTCTGGTGTAACAAATGATGTTTGGCCTGAGAATGAGAACGAAGATATAGATCGTGCCATTGCATTATCTCTGGCAGAGCAAAATCATAGAGGAAACCATGTAAATGACTACAGATCTCAATTAGAAGAAGATGAACAACTTGCCAGAGCTATAGAAGAAAGCCTAAATCTAGAGTCTCCTCCGAAATATGGAAACGAGAACATGTATCAACCCCATCCGGCGGTTCCAATTCCAGTACCAGTGTATTTCCCAATGGGATCAAGGATTTGTGCTGGCTGCCATACTGAGATTGGTTATGGACGATATCTAAATTGTTTGAATGCTTTCTGGCATCCTGAATGCTTCCGCTGTCATGCTTGCAACCTACCGATCTCTGATTATGAGTTCTCCACGTCGGGAAATTACCCTTACCATAAATCATGCTATAAGGAAAGCTACCATCCAAAATGTGACGTCTGCAAGCATTTCATTCCAACAAACCCTGCTGGTCTTATTGAATATAGGGCACATCCATTCTGGGTCCAAAAATATTGCCCTTCTCATGAACACGATAACACTCCAAGATGTTGCAGCTGTGAGCGAATGGAGCCACGAGAGACTGGATATATCGGTCTTAATGATGGCCGGAAGCTTTGCTTAGAGTGCCTTGACTCTGCAATCATGGATACAAGCGAATGCCAACCGCTTTATGTTGATATACAAAGATTTTATGAAAGCTTAGACATGAAATTGGAGCAGCAAATTCCACTTCTCTTGGTTGAAAGACAAGCCCTGAATGAAGCAAGAGAGGGGGAGAAGCATGTAATGACGTTTCCTTCTCTCTTGTCCGTGCTATTAAATGATACATTGCGTTTGAACTTTAATCAGATCTCGAGACGACCGAGACTTGGGGCAGGAAATAGAGCGGTCGACATGAGAACACAATCATACAAATTGACCAGACGTTGCGATGTGACGGCAATTCTCATTTTATTCGGACTTCCAAGATTGCTTACTGGATCGATCCTAGCTCACGAGATGATGCATGCATGGCTGCGGCTTAAAGGCTACCGAACCCTAAGTCAAAACGTCGAAGAAGGTATATGTCAGGTTATGGCATACATGTGGTTGCATTCTGAACTCACTTCGGCGTCAGCCTCATCCTCATCTTCAACATCTAGAAAAGGGAAAAGACCCCCTTTTGAGATGAAGCTCGGCGAGTTCTTCAAGCACCAGATTGAATCCGACATCTCGCCAGTTTACGGAGACGGGTTTAGGGCAGGTCACCAAGCAGTGCAGAAGTATGGTCTTCAGAAGACCCTAAACCATATCTGGATGACTGGTACTTTTCCATTTTGA 2376 0.415 MSFIHNQASPTHIGIRTVEAENVCNFSTHSDLCISIATWNMNGQVSFEELADMVGSNREFELLAVGLQEAPKERKVATLLKEALHENYLNYNSLDTHNMIGKVIMGSLQLYLFGPSNAKRSSITELKMDKQSIGGFGGIIGRKKGAVAIRINYKGIRIVFISCHLSAHASKVEERNCECRHISHSLFSKNWNPYSRPSHITIWLGDLNYRLQGIDTYPARNLINNDLHQRLHGKDQLLQEAGRGQIFNGFCEGTLTFKPTYKYNKGSSNYDTSYKVRVPAWTDRILFKIEDESDIEATLHSYESMDEINGSDHKPKEEGICSDQKISEGHYHSYYNGDADSYLPSTSGVTNDVWPENENEDIDRAIALSLAEQNHRGNHVNDYRSQLEEDEQLARAIEESLNLESPPKYGNENMYQPHPAVPIPVPVYFPMGSRICAGCHTEIGYGRYLNCLNAFWHPECFRCHACNLPISDYEFSTSGNYPYHKSCYKESYHPKCDVCKHFIPTNPAGLIEYRAHPFWVQKYCPSHEHDNTPRCCSCERMEPRETGYIGLNDGRKLCLECLDSAIMDTSECQPLYVDIQRFYESLDMKLEQQIPLLLVERQALNEAREGEKHVMTFPSLLSVLLNDTLRLNFNQISRRPRLGAGNRAVDMRTQSYKLTRRCDVTAILILFGLPRLLTGSILAHEMMHAWLRLKGYRTLSQNVEEGICQVMAYMWLHSELTSASASSSSSTSRKGKRPPFEMKLGEFFKHQIESDISPVYGDGFRAGHQAVQKYGLQKTLNHIWMTGTFPF 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03270 791 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 462 517 - -
Adu06g03270 791 Pfam Ubiquitin interaction motif 358 373 IPR003903 -
Adu06g03270 791 Pfam Ubiquitin interaction motif 388 401 IPR003903 -
Adu06g03270 791 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 428 461 - -
Adu06g03270 791 SMART i5p_5 30 328 IPR000300 GO:0016791|GO:0046856
Adu06g03270 791 CDD LIM 463 538 - -
Adu06g03270 791 ProSitePatterns LIM zinc-binding domain signature. 436 470 IPR001781 -
Adu06g03270 791 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 357 376 IPR003903 -
Adu06g03270 791 PANTHER PROTEIN DA1-LIKE 322 791 - -
Adu06g03270 791 Pfam Protein DA1 586 785 IPR022087 -
Adu06g03270 791 PANTHER PROTEIN DA1-RELATED 2 322 791 IPR045218 -
Adu06g03270 791 Pfam Endonuclease/Exonuclease/phosphatase family 37 313 IPR005135 GO:0003824
Adu06g03270 791 CDD LIM_DA1 436 488 - -
Adu06g03270 791 Pfam LIM domain 436 490 IPR001781 -
Adu06g03270 791 SMART uim 388 407 IPR003903 -
Adu06g03270 791 SMART uim 357 376 IPR003903 -
Adu06g03270 791 SUPERFAMILY DNase I-like 21 315 IPR036691 -
Adu06g03270 791 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 388 407 IPR003903 -
Adu06g03270 791 ProSiteProfiles LIM domain profile. 434 494 IPR001781 -
Adu06g03270 791 Gene3D Cysteine Rich Protein 430 494 - -
Adu06g03270 791 Coils Coil 380 400 - -
Adu06g03270 791 Gene3D Endonuclease/exonuclease/phosphatase 13 316 IPR036691 -
Adu06g03270 791 SMART lim_4 435 487 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03270 Adu-Chr6 111132235 111149645 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu06g03270 Exo_endo_phos 4.5e-07 CL0530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03270 06 111132235 111149645 Adu06g03270 06 111132235 111149645 ECH