Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03259 ATGGCTATGAGAGGGGATGGGGAAGAAGCCACGGGTGTCTCGCGTCCCCCGGCGGGAATGCACTCGGAACGGACGCCCTCGGCCGACTTCTTATCGGACAATGAGCTCTCCATGCAATCCAACACCGCCGCCTCCCCCATGAGCCCTTACTATGATCCTGGCCGCCTCAGCGGCGAGGGATCCCCATTGATGATGTCACCATGGAACCAAACCGCAAATTCGCGATTTTCAAAGGAATTATGCTCCCAAGGCGGCGAAAGCACCGCACAAAGTGCTCTCCTGGGCTCCCTGGTCCGGGAGGAGGGACACATATACTCCTTGGCTGCCACCGGTAACCTCCTTTACACTGGCTCCGAGAGCAAGAACATCCGTGTGTGGAAGAACCTCCAAGAATTCTGTGGCTTCAAATCAAACAGTGGTTTGGTTAAGGCCATCATAATATCTGGACATAAAATCTTCACTGGTCACCAAGATGGTAAAATTCGTGTTTGGAAGGTTAACCCTAAGGCACCAAATGTTCACAAACGCGCAGGAACGTTGCCAACTTTGAAAGATATACTCAAGAGTTCTCTCAAACCAAGTAACTACATTGAAGTTCGGAAAAATCGTTCAGCACTTTGGATTAAGCATTCTGATGCTGTTTCCGCCTTAAGCCTTTCTCATTGTAAAACATTGCTCTATTCAGCTTCATGGGATAGAAGCATAAAGGTGTGGCGCATCTCCGATAAGAGGTGCATGGAATCCATCCCGGCTCACCAAGACACGGTGAATTCCGTGGTGTGCGGCGTTGATGGCCTCGTCTTCTCCGGCTCTGCCGATGGAACCGTTAAGATGTGGAAGCGGGAAACTCCCTCCTCCCGCTCCACCAAGTGCACCAAACACACCAATGCACAAACCCTGCTCAAGCAAGAATCCGCCGTCACCGCCCTCACCCTCGATGCCTCCTTCTCTACCCTCTACTGTGGCTCCTCCGACGGTCTCGTCAACTTCTGGGACAGTAACAACAACTTCGCCCATGGCGGCGTCCTTAAAGGCCACAAACTAGCCGTCCTTTGCCTCGCCGCTGCCGGAACCTTAGTTTTCAGCGGATCCGCCGACAAGACAATCTGCGTGTGGAAGAAGGAGGGAACGATCCACACGTGCGTGTCGATGTTGACGGGGCACGAGGGTCCAGTGAAGTGTCTGGCGGTGGAGGAAGACAAGGAGGCGAAGGCGCGTGGTGGTGAGAGGCGGTGGGTGTTGTACAGTGGGAGCTTGGATAAGTCTGTAAAGGTCTGGAGCGTTGCCGATGTTGGAGGTGGTGATAATCAGGAGCAGCAGCGCCACCACCGTATGTTTTCTGATTCAGATTCAATACCATTTGCTGAATCTGTTAGTAGCTACTCTTCTTCGTGCCGGAGCAATAACAGAAAATAA 1416 0.5268 MAMRGDGEEATGVSRPPAGMHSERTPSADFLSDNELSMQSNTAASPMSPYYDPGRLSGEGSPLMMSPWNQTANSRFSKELCSQGGESTAQSALLGSLVREEGHIYSLAATGNLLYTGSESKNIRVWKNLQEFCGFKSNSGLVKAIIISGHKIFTGHQDGKIRVWKVNPKAPNVHKRAGTLPTLKDILKSSLKPSNYIEVRKNRSALWIKHSDAVSALSLSHCKTLLYSASWDRSIKVWRISDKRCMESIPAHQDTVNSVVCGVDGLVFSGSADGTVKMWKRETPSSRSTKCTKHTNAQTLLKQESAVTALTLDASFSTLYCGSSDGLVNFWDSNNNFAHGGVLKGHKLAVLCLAAAGTLVFSGSADKTICVWKKEGTIHTCVSMLTGHEGPVKCLAVEEDKEAKARGGERRWVLYSGSLDKSVKVWSVADVGGGDNQEQQRHHRMFSDSDSIPFAESVSSYSSSCRSNNRK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03259 471 Pfam WD domain, G-beta repeat 101 127 IPR001680 GO:0005515
Adu06g03259 471 Pfam WD domain, G-beta repeat 341 373 IPR001680 GO:0005515
Adu06g03259 471 Pfam WD domain, G-beta repeat 244 280 IPR001680 GO:0005515
Adu06g03259 471 Pfam WD domain, G-beta repeat 210 238 IPR001680 GO:0005515
Adu06g03259 471 Pfam WD domain, G-beta repeat 381 427 IPR001680 GO:0005515
Adu06g03259 471 Gene3D - 340 470 IPR015943 GO:0005515
Adu06g03259 471 SMART WD40_4 378 427 IPR001680 GO:0005515
Adu06g03259 471 SMART WD40_4 201 239 IPR001680 GO:0005515
Adu06g03259 471 SMART WD40_4 128 165 IPR001680 GO:0005515
Adu06g03259 471 SMART WD40_4 242 280 IPR001680 GO:0005515
Adu06g03259 471 SMART WD40_4 336 373 IPR001680 GO:0005515
Adu06g03259 471 SMART WD40_4 293 332 IPR001680 GO:0005515
Adu06g03259 471 SMART WD40_4 90 127 IPR001680 GO:0005515
Adu06g03259 471 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 207 241 - -
Adu06g03259 471 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 29 450 IPR045182 -
Adu06g03259 471 MobiDBLite consensus disorder prediction 1 28 - -
Adu06g03259 471 ProSiteProfiles Trp-Asp (WD) repeats profile. 249 289 IPR001680 GO:0005515
Adu06g03259 471 SUPERFAMILY WD40 repeat-like 100 429 IPR036322 GO:0005515
Adu06g03259 471 Gene3D - 201 339 IPR015943 GO:0005515
Adu06g03259 471 PRINTS G protein beta WD-40 repeat signature 226 240 IPR020472 -
Adu06g03259 471 PRINTS G protein beta WD-40 repeat signature 267 281 IPR020472 -
Adu06g03259 471 PRINTS G protein beta WD-40 repeat signature 414 428 IPR020472 -
Adu06g03259 471 Gene3D - 86 200 IPR015943 GO:0005515
Adu06g03259 471 ProSiteProfiles Trp-Asp (WD) repeats profile. 207 248 IPR001680 GO:0005515
Adu06g03259 471 ProSiteProfiles Trp-Asp (WD) repeats profile. 343 373 IPR001680 GO:0005515
Adu06g03259 471 ProSiteProfiles Trp-Asp (WD) repeats profile. 300 332 IPR001680 GO:0005515
Adu06g03259 471 CDD WD40 101 427 - -
Adu06g03259 471 PANTHER PROTEIN JINGUBANG 29 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03259 Adu-Chr6 111009624 111011960 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00406 08 7278163 7280518 Adu06g03259 06 111009624 111011960 PCT