Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03245 ATGTTGACAAATTCTCTTCCATCAATAATGCAAACCTTGTTAGCATCATCACCCCCTAAATTTCAAGGACCAGATTTGTCCTTAAACATAAGCCCTCCATGTGTTAGTGTCTCAGATTCCGAAAACAACAACCTCAACAACAACAACAACAACATGAACATGAACATGAACATGAACATGTTCCTAAGTAGTAGGAAGAAAATTGTTTACAATGATATAAGTACTAGTTCAACTACTTCAGATTCAGGTGGTAGTAGTTGTGGAAGTGCAAGTGACTTAAGCCATGAAAACAACAACCTTCTTCATCATCAACCTACATTGACCTTAGATTTGAATAATTACCATCATCATCATCAAGGACTTTCTAGAAGCTTCAATAATCACCACCATTTCCAACCTCAAATCTATGGCCGCGAGTTCAAGAGAAGCTCCAGGGTCATTAATGGAGTCAAGAGGAGCGTGAGAGCACCTAGGATGAGATGGACAACAACCCTCCATGCCCATTTTGTTCATGCTGTTCAACTCCTTGGTGGCCATGAAAGGGCAACACCAAAGTCAGTTTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAAAGTCACTTACAGATGTATAGAACAGTGAAGAGCACCGACAAAAGCACAGGTCATGGCCAGACAGATATGGGTTTAATCCCAATGCCAAGGATTAATAATGTTGCTCACTTGCATGCCAATAATGGAGTTTCAGCTTCTCATGATGATAGACCAAATAATTTACCACATCCACCACAAAATTATTCCCAAAGGTCATGGCAATCATCAATAATGGAGGCAAATACAAACAATAGTAGACAAAAACCCCAACTTGGTTTGACGGATTCTCATACAAAGGGATATGAAACCATGGTGGAAGAGCACAATTGTGTGGGCATGTCTAATTGCATGAAGGAGAATAAGTTGGATTCTACTTCATTGTCAAGTTCTGATGAGTTGATGCTTGATCTTGAATTCACCCTTGGAAGGCCAAATTGGGAAAAGGAACATCAAAAGGAGTCATCAAGAGTAGAATTAACCCTTCTCAAATGTTAA 1080 0.3944 MLTNSLPSIMQTLLASSPPKFQGPDLSLNISPPCVSVSDSENNNLNNNNNNMNMNMNMNMFLSSRKKIVYNDISTSSTTSDSGGSSCGSASDLSHENNNLLHHQPTLTLDLNNYHHHHQGLSRSFNNHHHFQPQIYGREFKRSSRVINGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKSTGHGQTDMGLIPMPRINNVAHLHANNGVSASHDDRPNNLPHPPQNYSQRSWQSSIMEANTNNSRQKPQLGLTDSHTKGYETMVEEHNCVGMSNCMKENKLDSTSLSSSDELMLDLEFTLGRPNWEKEHQKESSRVELTLLKC 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03245 359 SUPERFAMILY Homeodomain-like 154 211 IPR009057 -
Adu06g03245 359 Gene3D - 156 213 - -
Adu06g03245 359 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 351 IPR044847 GO:0000976|GO:0006355|GO:0010158
Adu06g03245 359 MobiDBLite consensus disorder prediction 243 267 - -
Adu06g03245 359 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 157 210 IPR006447 GO:0003677
Adu06g03245 359 MobiDBLite consensus disorder prediction 74 97 - -
Adu06g03245 359 Pfam Myb-like DNA-binding domain 158 209 IPR001005 -
Adu06g03245 359 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03245 Adu-Chr6 110818442 110824296 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu06g03245 Myb_DNA-binding 1.6e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03245 06 110818442 110824296 Adu06g03245 06 110818442 110824296 ECH
Adu06g03245 06 110818442 110824296 Adu08g00312 08 5585589 5588532 PCT