Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03228 ATGCCTCCAATAATTTCACGCAAACCATCATCACCACCATCATGTGTTGTGCATGATCATCATGATGAAAAAACCATGAAGAAACAAAGCAACTACCAGAGATCAAAAACATGTAACAGTATCAACACCAACGTTCTTGATGAGGTTCAGCATGTTACAAGGCAGAGGAAGTTGGTTAGGCACCTTAAGGACAAAGAAGTCTTTGATTTGTTGCATTTGCACTCCACTATCAATTGTTCTTGTTCTTCTTCCTGCTCGCGAGGCCGTAGTTCTAGCATCGGCTGCGGACACTGGTCTATTTCTGCTAAGCCGCAGCCGTTGCCACTTCCCGAGTCAACGGGCCTCGGATTAGGCCATGTCCACCTGCTTGGATCTCCTTCCACAGAACAGCCTAGTTTTGCTTTGACTTTGAGGAAAACAGTGAATCATGGTGCATTGACATGTACAAAACCTTCAAGCAATTTGGATAGACCCTCTCAAGACCTTACAACTATAGCAAAAGCAAAAAATAATCTGAGAGTGCACATTCCAGCTAAAACTTTCTTGGCAGGGAATAGTTCATGCAAAATTCCCCCATCATTGTGTCATTATGATGAAAATGATGATGATGATTGTGTGAGTATTTCTGGTTTGAGCATGCATGTTGCTGCCAAGAGTGCCCCATCAAGTGTCTTCTCTAGTCCAGTCACTAGTCCACATGGATCAAACAACAACCCACAACATTTCTTTGATCATCATCACACCATCAATAATATCCTTCAACAACTCAATGACAATGATTTCAATTTGTATCATCATCATCACCACCACCTACCACAAGCTAATACTAACAAAAATAATGTTCATATTTGCCCTGCTAGCTTAAGTACTGCTTATCATTCTAATCCCAAAAATAACCATGTTGATGCACATCCCTTGCCACTTCCTCCTAGAGTTTCATCATCAATGATACTACATCAACCATCACCTTCTTCAATGAAAGGCCAATGGCAGAAAGGGAAACTAATCGGTCGCGGCACCTTTGGAAGTGTTTATCATGCAACCAACCTAGAAACTGGAGCTTCTTGTGCAATGAAGCAAGTGGATATAATTCCTGATGATCCTACATCTGCTGAGTGCATAAAGCAACTAGAGCAGGAAATCAAAATCCTTCATCAACTACACCACCCCAATATAGTGCAGTATTATGGAAGTGAAATAGTTGGTGATCATTTGTACATATATATGGAGTATGTTCATCCAGGATCAGTTAATAAATTTATTAGGGAGCATTGTGGAGCTATGACAGAATCTGTAGTTCGAAATTTCACAAGACACATTCTCTCTGGATTGGCCTACTTACACAGCACCAAGACTATTCACAGGGATATCAAAGGTGCAAACTTGCTTGTTAATGAATCTGGCATTGTCAAGCTTGCAGATTTTGGGATGGCCAAAATTCTCTCAGGGAATTCATATGAACTTTCTTTGAAGGGAAGTCCTTATTGGATGGCTCCTGAGGTGATGAAAGCTGCCATTAAGAATGAATCAAATCCTGATGTTGCCATGGGTATTGATATATGGAGCTTAGGCTGCACCATCATTGAAATGTTGTCAGGAAAGCCTCCTTGGAGTGACCTTGAAGGGCCATCAGCAATGTTCAAGGTACTACAGAGCACACCACCAATACCAGAGAGTTTATCATCAGTGGGAAAGGATTTCCTGCAGCAATGTTTCAGAAGGGACCCTGCTGATAGACCTTCTGCATCAATGCTTCTTAACCATCCCTTTCTCCACAACTTTCATGATCAAGATAATCCTCTAATTCATCCTCATTTAAATTTGTGTCACAAAGGAGACCAAGGACAAGGAGATAATTCATCTAGTCCCAAAGATAATACCAAAAATAGACATGATATATTGCCAACCTCCATGAGCACAAAGATTTTCAACAAAACTCAGAAATTAATGGGGTTTTTTTCTTTATTTGCTATAATTTAA 1980 0.4051 MPPIISRKPSSPPSCVVHDHHDEKTMKKQSNYQRSKTCNSINTNVLDEVQHVTRQRKLVRHLKDKEVFDLLHLHSTINCSCSSSCSRGRSSSIGCGHWSISAKPQPLPLPESTGLGLGHVHLLGSPSTEQPSFALTLRKTVNHGALTCTKPSSNLDRPSQDLTTIAKAKNNLRVHIPAKTFLAGNSSCKIPPSLCHYDENDDDDCVSISGLSMHVAAKSAPSSVFSSPVTSPHGSNNNPQHFFDHHHTINNILQQLNDNDFNLYHHHHHHLPQANTNKNNVHICPASLSTAYHSNPKNNHVDAHPLPLPPRVSSSMILHQPSPSSMKGQWQKGKLIGRGTFGSVYHATNLETGASCAMKQVDIIPDDPTSAECIKQLEQEIKILHQLHHPNIVQYYGSEIVGDHLYIYMEYVHPGSVNKFIREHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVNESGIVKLADFGMAKILSGNSYELSLKGSPYWMAPEVMKAAIKNESNPDVAMGIDIWSLGCTIIEMLSGKPPWSDLEGPSAMFKVLQSTPPIPESLSSVGKDFLQQCFRRDPADRPSASMLLNHPFLHNFHDQDNPLIHPHLNLCHKGDQGQGDNSSSPKDNTKNRHDILPTSMSTKIFNKTQKLMGFFSLFAII 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03228 659 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Adu06g03228 659 MobiDBLite consensus disorder prediction 609 633 - -
Adu06g03228 659 Pfam Protein kinase domain 331 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g03228 659 ProSiteProfiles Protein kinase domain profile. 330 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g03228 659 Gene3D Transferase(Phosphotransferase) domain 1 327 629 - -
Adu06g03228 659 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 25 646 - -
Adu06g03228 659 SUPERFAMILY Protein kinase-like (PK-like) 313 608 IPR011009 -
Adu06g03228 659 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 25 646 - -
Adu06g03228 659 SMART serkin_6 330 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03228 Adu-Chr6 110588153 110594449 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Adu06g03228 Pkinase 1.2e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03228 06 110588153 110594449 Adu06g03228 06 110588153 110594449 ECH
Adu06g03228 06 110588153 110594449 Adu08g00327 08 5778958 5783494 PCT