Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03201 ATGCAAGCTGTGGAGAGGCTAGGGAGCTTTATCACCCGCGGAGTTTCGACTGTTTCAATGCCGTTCATCCCTTATGGTGGTGCTGTGGACATTGTTGTAGTTCAACAAAAAGATGGCAGCTTCAAGTCCTCTCCTTGGTTCGTTCGATTCGGGAAACTTCACAGGGTTCTCAAGGCTGATGAGAAGAAGGTTAGCATCAGTGTCAATGGATCCGAAGCCGGTTTCCACATGCACATGAACCATAAAGGGGAAGCCTTCTTTTTGAGGGATACACATTGTGAACAACAAGGGGATGAAGATTCCGGATCTAGCGAATCATCATCGTCCGGCGAAGATGCTGATGTTGTCCTACCATGGGGCAGGAAGAGGAATTTCAAGTCAAAAAGTTGCAAGTTTGATCCGGATGGATCATTTGTAGCTGATATGAATGCCTTAAACAATGATAAGATTGTGGACAGGACTAATTCTCGCGGATCCCGGCTATTTAGGCTTGTGTTGGGGCAAAGGTCCTTCAATGGGGAAGTTGATGAAGATGCAGAAGACTTATTGGAACGTGCTGAGATTGCAGCCAACCTTTTGGACCTCAAGTGGTCTACGAATCTGAAATTCGACCAGCTACCTCGTCGAGAAAGAAAGAACACTAGGGGTGGTACCTTGGAGAATGGTTTACATTCATCAAAGGTTGATGATTTGCATGCTCAGCAAAGGGATTGTTCTCATAGTGTCCTTGATATGTTTGATGTTGCGGACTTTGAAAAGCTACCTAAATTTCAAAAATCTCGCACCATTAGTGTATATCGGCCACATCGAAAAGCCAACAAGGTTAGGGCAGATACCCCAACATCTGAACAGCTAGCATCCTTGAATCTGCAGGAAGGAAGGAACTTGGTAACCTTTCGTTATTCTACAGCTATGTTGGGGACACAGAAGATTGATGCTCGGATATATTTGTGGAAATGGAACACCCGAATAGTGATATCGGATGTGGATGGAACAATTACAAGGTCTGATGTTCTAGGTCAGGTCATGCCTTTAGTCGGAATCGATTGGTCACAAACCGGTGTTGCACATTTATTCTCTGCTATCCAGGATAATGGATACCAACTACTTTTTCTTAGTGCTCGTGCAATTTCTCAAGCCTGTCATACCAGACGATTCCTATTCAACCTTAAACAGGATGGGAAAGTATTACCGGATGGTCCGGTCGTCATTTCCCCGGACGGACTTTTTCCTGCTCTGTATCGAGAAGTTATCCGGCGAGCTCCTCATGAATTCAAAATCGCATGCTTAGAGGAAATAAGGGCACTTTTCCCTCCTGATTGCAATCCATTCTATGCTGGTTTCGGAAATAGGGATACTGATGAACTCAGCTACCTTAAGGTTGGAATCCCTAAAGGAAAAATCTTCATAATCAATCCCAGGGGAGAGATTGCTGTAAATTGTTTCGACGCGCAATCATATCCTTCTCTTCATGCCGTTGTAGATGGAATATTCCCCCCGACAGACTCGTCTGAGCAGGTTTACTTATGA 1530 0.4464 MQAVERLGSFITRGVSTVSMPFIPYGGAVDIVVVQQKDGSFKSSPWFVRFGKLHRVLKADEKKVSISVNGSEAGFHMHMNHKGEAFFLRDTHCEQQGDEDSGSSESSSSGEDADVVLPWGRKRNFKSKSCKFDPDGSFVADMNALNNDKIVDRTNSRGSRLFRLVLGQRSFNGEVDEDAEDLLERAEIAANLLDLKWSTNLKFDQLPRRERKNTRGGTLENGLHSSKVDDLHAQQRDCSHSVLDMFDVADFEKLPKFQKSRTISVYRPHRKANKVRADTPTSEQLASLNLQEGRNLVTFRYSTAMLGTQKIDARIYLWKWNTRIVISDVDGTITRSDVLGQVMPLVGIDWSQTGVAHLFSAIQDNGYQLLFLSARAISQACHTRRFLFNLKQDGKVLPDGPVVISPDGLFPALYREVIRRAPHEFKIACLEEIRALFPPDCNPFYAGFGNRDTDELSYLKVGIPKGKIFIINPRGEIAVNCFDAQSYPSLHAVVDGIFPPTDSSEQVYL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03201 509 PANTHER GH19076P 1 212 - -
Adu06g03201 509 Pfam LNS2 (Lipin/Ned1/Smp2) 279 499 IPR013209 -
Adu06g03201 509 SUPERFAMILY HAD-like 316 467 IPR036412 -
Adu06g03201 509 SMART lns2 324 480 IPR031315 -
Adu06g03201 509 MobiDBLite consensus disorder prediction 94 113 - -
Adu06g03201 509 PANTHER LIPIN 264 506 IPR026058 -
Adu06g03201 509 PANTHER LIPIN 1 212 IPR026058 -
Adu06g03201 509 PANTHER GH19076P 264 506 - -
Adu06g03201 509 Pfam lipin, N-terminal conserved region 1 96 IPR007651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03201 Adu-Chr6 110341087 110345420 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03201 06 110341087 110345420 Adu06g03201 06 110341087 110345420 ECH
Adu06g03201 06 110341087 110345420 Adu08g00351 08 6210156 6216591 PCT