Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03197 ATGCCATCACAAGGTAAGGCAGAAAAAAGCATAAAAATGAAAGCGGTGATGGAAGAGCCTCAAGTGAAAGCACCAAAGATGCCAAAGAAGAATGCAATGAAGATAGAGAAGCCTAGTTTCTTTGATCAAATTATGGGTAAAGGAGTGAAGAACATTGGTATGGTGAACTTTGATGAAGAAGAAGATGATGTTAGTGAATGGAACATGCAAGGTGAAAAAACAATCATCCCAATTCACTTTGAGAAGGTATCCTCCCAATTCAATTGGACAGATTTGTTCCCTGAATGGATCGACGAAGAAGAAGAAAGCGATGTTCCATCTTGTCCAGATATTCCCATGCCGGATTTCAATGTGTATCAAAACATGGACATAATTGTGGCGAAGTTGCCATGCAACAATAATAAAGAAGGGTGGGGTAGGAATGTTTATAGGCTACAAGTTCATCTAATTGTGGCAAATTTGGCTGTGAAGAATAAGGGTAAGAGGGATTATGGGAGATTGAAGACTAAGGTTGTTTTTTTAAGCAAGTGTAGGCCAATGTTGGAAATTTTTAGGTGCAATGATTTGGTTAAGAATGATGGTGATTGGTGGTACTATGAGCCTGATTTGAAGAGATTGGAGCAAAAGGTTTCATTGCCTGTTGGATCATGCAAGTTGGCTTTGCCTCTTTGGGAACAAGGGATTGACAAAGTGTATGACACGTCGAAGATTCAAAAAATGGTTACAAAGAATGCAAAAACAAAACGTGAGGCGTACGCTACAGTGCTTCACTCCTCCGACGACTATGTGTGTGGCGCAATAATACTGGCACAAAGCCTCCTCCGAACGGGAACCGAGCGTGACCTAATCCTCCTTCTTGACAACTCCATCTCTGTTGCAAAGCGTCGCGCGCTCTCCGCCTCTGGGTGGAAGATCCGAATCATAACTCGGATCAGAAACCCAAAGGCGGAGAAACACTCCTACAACGAGTACAACTACAGTAAATTTCGGTTGTGGCAGTTAACAGACTATGACAAGGTTATTTTTATTGATGCTGACATTGTTGTTTTGAGGAACCTTGATGTTCTGTTTCATTTTCCACAAATGTCGGCCACTGGGAATGATCAGAGTATATTTAATTCTGGGATTATGGTGATTGAGCCTTCAAATTGCACATTTAATGTGCTGATGGAGAGTAGATATGATATTGTTTCATATAATGGTGGTGACCAAGGTTTCCTTAACGAGATTTTTGTCTGGTGGCACAGGTTACCAAGGAGGGTGAACTACTTGAAGAATTTTTGGGCCAACACAACATTAGAAGCAAGCAAGAAGAACCATCTATTTGGGGCAGAGCCACCAAAGCTATACTCAATACACTACCTTGGATTAAAGCCATGGTATTGTTATAGGGACTATGATTGCAATTGGGACGTTGAGGACCAAAGGGTGTATGCTAGTGACGTGGCACATCATAAGTGGTGGAAGCTGCATGACCAAATGGACAAAAAACTTCAACGCATGTGTAGGCTCACAAAACGACGTCGTACAAACCTCAATTGGGAGAGAAGAAAAGCTTCCAAATTAGGTTTGCCTGATCAACATTGGAAGATTAATATTACGGATCCCAGAAGATCTGGTTCACTTTTGATGAATTAA 1638 0.4133 MPSQGKAEKSIKMKAVMEEPQVKAPKMPKKNAMKIEKPSFFDQIMGKGVKNIGMVNFDEEEDDVSEWNMQGEKTIIPIHFEKVSSQFNWTDLFPEWIDEEEESDVPSCPDIPMPDFNVYQNMDIIVAKLPCNNNKEGWGRNVYRLQVHLIVANLAVKNKGKRDYGRLKTKVVFLSKCRPMLEIFRCNDLVKNDGDWWYYEPDLKRLEQKVSLPVGSCKLALPLWEQGIDKVYDTSKIQKMVTKNAKTKREAYATVLHSSDDYVCGAIILAQSLLRTGTERDLILLLDNSISVAKRRALSASGWKIRIITRIRNPKAEKHSYNEYNYSKFRLWQLTDYDKVIFIDADIVVLRNLDVLFHFPQMSATGNDQSIFNSGIMVIEPSNCTFNVLMESRYDIVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWANTTLEASKKNHLFGAEPPKLYSIHYLGLKPWYCYRDYDCNWDVEDQRVYASDVAHHKWWKLHDQMDKKLQRMCRLTKRRRTNLNWERRKASKLGLPDQHWKINITDPRRSGSLLMN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03197 545 CDD GT8_Glycogenin 250 494 - -
Adu06g03197 545 Pfam Glycosyl transferase family 8 255 460 IPR002495 GO:0016757
Adu06g03197 545 SUPERFAMILY Nucleotide-diphospho-sugar transferases 252 500 IPR029044 -
Adu06g03197 545 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 10 539 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Adu06g03197 545 PANTHER GLYCOGENIN SUBFAMILY MEMBER 10 539 - -
Adu06g03197 545 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 248 499 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03197 Adu-Chr6 110310450 110315939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03197 13 544 Glycosyltransferase AT4G33330 65.485 0.0 717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03197 06 110310450 110315939 Adu06g03197 06 110310450 110315939 ECH
Adu06g03197 06 110310450 110315939 Adu08g00354 08 6230717 6234456 PCT