Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu06g03191 | ATGGAAAAGGTGGAGCGCGAGTGCAGCAATGATCGCAATTGTTTTGCATTTGATTTGGTGCTTAGCTTAATACGTAGAGAGCTACAGAGGAAAGTGCAGGAAGCTCAAATATCGGTTGAAGAGCGGGAGGAGATGATGAGGAATTTGGAGAGGAGAGAAACAGAATATATGAGGCTTCAGAGACGTAAAGTTGGAATTGATGATTTTGAGCAATTAACCGTAATTGGTAAAGGTGCTTTTGGTGAGGTGAGGCTATGTCGTGCTAAAGGTACAGGAGAGGTTTTTGCCATGAAGAAGTTAAAGAAGTCAGAAATGCTTAGCCGCGGACAGGTTGAACATGTTCGATCAGAGAGGAACTTGCTGGCAGAGGTTGACAGTAGATGCATAGTAAAACTCCATTATTCATTCCAAGATGCAGATTTCTTATATCTCATCATGGAATATTTACCTGGTGGTGACATTATGACATTGTTGATGAGAGAAGATATTCTTTCTGAGGATGTTGCTCGTTTCTACATTGCTGAAAGCATTCTTGCTATTCACTCAATACATCAGTACAACTATGTCCACAGGGATATAAAACCAGATAACCTGATACTGGATAAAAATGGCCATTTGAAGCTTTCGGACTTTGGATTATGTAAGCCTCTTGATGATAAGTATTCAAGTATATTGGAAAATGAAGATTTTACCAGTCAAGAATCAACTAGTGAAACTGATGGATACTCTGCGTCCCCTTGGTTGATGCCTAAGGAACAATTACAGCAGTGGAAACGTAATCGGCGAACATTGGCATATTCAACGGTTGGAACTCTTGATTATATGGCACCTGAAGTTTTGCTCAAGAAGGGATATGGAATGGAATGTGACTGGTGGTCTCTTGGGGCAATCATGTATGAGATGCTTATTGGGTATCCTCCCTTCTGTTCTGATGATCCAAGGATGGCCTGCCGAAAGATTGTTAACTGGAGAACATGCCTGAAATTCCCTGAAGAACCCAAGATATCAGCTGAAGCTAAGGATCTCATATGTCGCTTACTATGTGATGTTGACACTAGACTAGGAACCAGAGGAATAGAAGAAATAAAGGCTCATCCATGGTTCAAGAGTGTTCAGTGGGATCTGCTTTATGAATCAGAGGCTGCATTTAGACCTACAGTTACTGGAGACTTGGATACGCAAAATTTTGAGAAGTTTCCTGATATAGAAGGTCCACCATCTGTAACTGCAACTGTAGGACCTTGGCGAAAGATGTTGACATCCAAAGACACCAATTTCATAGGATATACTTTTAAGAAATCAGACATTCTTAAATCACTTGAAAATTCAGGTGCAGACGTTAAAGTAAATGGATCATCAAATGCCCCATCATTGATATCCTTGTTAGGTAGGATTGATTTGCAAGATACCGTCATCCCAGAAACTGAGCAGAAGCCATAA | 1440 | 0.4062 | MEKVERECSNDRNCFAFDLVLSLIRRELQRKVQEAQISVEEREEMMRNLERRETEYMRLQRRKVGIDDFEQLTVIGKGAFGEVRLCRAKGTGEVFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDADFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQYNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILENEDFTSQESTSETDGYSASPWLMPKEQLQQWKRNRRTLAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRMACRKIVNWRTCLKFPEEPKISAEAKDLICRLLCDVDTRLGTRGIEEIKAHPWFKSVQWDLLYESEAAFRPTVTGDLDTQNFEKFPDIEGPPSVTATVGPWRKMLTSKDTNFIGYTFKKSDILKSLENSGADVKVNGSSNAPSLISLLGRIDLQDTVIPETEQKP | 479 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu06g03191 | 479 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524 | |
| Adu06g03191 | 479 | Pfam | Protein kinase domain | 69 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Adu06g03191 | 479 | ProSiteProfiles | Protein kinase domain profile. | 69 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Adu06g03191 | 479 | CDD | STKc_NDR_like | 67 | 432 | - | - | |
| Adu06g03191 | 479 | SUPERFAMILY | Protein kinase-like (PK-like) | 46 | 419 | IPR011009 | - | |
| Adu06g03191 | 479 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 24 | 467 | - | - | |
| Adu06g03191 | 479 | Gene3D | Phosphorylase Kinase; domain 1 | 60 | 154 | - | - | |
| Adu06g03191 | 479 | SMART | pkinase_C_6 | 369 | 433 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
| Adu06g03191 | 479 | SMART | serkin_6 | 69 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Adu06g03191 | 479 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 24 | 467 | - | - | |
| Adu06g03191 | 479 | Gene3D | Transferase(Phosphotransferase) domain 1 | 155 | 385 | - | - | |
| Adu06g03191 | 479 | Pfam | Protein kinase C terminal domain | 387 | 431 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
| Adu06g03191 | 479 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 188 | 200 | IPR008271 | GO:0004672|GO:0006468 | |
| Adu06g03191 | 479 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 369 | 441 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
| Adu06g03191 | 479 | Coils | Coil | 25 | 62 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu06g03191 | Adu-Chr6 | 110188482 | 110194952 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu06g03191 | 25 | 469 | AGC Kinase Gene Family | AT5G09890 | 81.069 | 0.0 | 764 |
Transcription factors information