Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03184 ATGGGAATCGTTTTGGACAGCAACTGCGAATCCATAGTGGTGTCTTTGGAGACACAGAAGGCGGTGCCGGCGCCGTTCCTCACCAAGACCTACGAGCTGGTGGACGACGCCGCCACCGATCACATTGTCTCGTGGGGAGAAGACGAAACCACCTTCGTTGTCTGGCGTCCTCCTGACTTCGCCCGCGACCTTCTTCCCAACTACTTCAAACATAATAACTTCTCCAGCTTCGTTCGCCAACTCAACACCTATGGTTTCAGAAAGATTGTACCTGATAGATGGGAATTTGCAAATGACTTCTTCAAGAAAGGGGAGAAGCATTTGTTGTGTGAGATTCATAGAAGAAAAACATCACACACTCATCCTCATCATCAACAACTACCATCATCCATCAACCATAACCAAAATCATTTTAACAACAATATTCATCTTCTTCCCTCTGCTACTACATTTTATCATCCTTTTCACCAACACAACAACCGAGTCAGCATCTCCCCTGACTCGGACGAGTTACCTACTTGGTGTGACTCGGACattattagcaacactactactactaccactactactgcttctTCATCAACGCTTACAGCACTCTCTCAAGACAACGAAAGATTAAGGAGAAGCAACAACATCTTAATGTCCGAACTAGCACACATGAAGAAGCTCTATAACGACATAATCTATTTCGTTCAGAATCATGTTAAGCCTGTCGCACCAAGCAACACTTACTCTTCTAGTTTCATTCTTCCACAACACCAACCTTCTTCTTCTTCAGCTACAACAACTAATTGCAACGCTTTCTCAATGTTGCATAAGCAAGTGCAACAACAACAACAACACCACCATGACTATTTGAATTCTCCAACAAACACATCGAGGAGTTCTATAACAATGATTGAAGACCAAAGTAGTAAGAGTTGCAAGACGAAGCTATTTGGGGTGTCTCTTCAATCCAATAAGAAAAGGGTGCACCCTGACTATGGATTTAGCCACGCTTTTGCGGAAACAAATAACAAGGCTCGTTTGGTGTTGGGAAATGATAATGATGATTATTTGGGATTGAATCTCATGCCTCCTTCTTAG 1086 0.4171 MGIVLDSNCESIVVSLETQKAVPAPFLTKTYELVDDAATDHIVSWGEDETTFVVWRPPDFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDFFKKGEKHLLCEIHRRKTSHTHPHHQQLPSSINHNQNHFNNNIHLLPSATTFYHPFHQHNNRVSISPDSDELPTWCDSDIISNTTTTTTTTASSSTLTALSQDNERLRRSNNILMSELAHMKKLYNDIIYFVQNHVKPVAPSNTYSSSFILPQHQPSSSSATTTNCNAFSMLHKQVQQQQQHHHDYLNSPTNTSRSSITMIEDQSSKSCKTKLFGVSLQSNKKRVHPDYGFSHAFAETNNKARLVLGNDNDDYLGLNLMPPS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03184 361 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g03184 361 PANTHER BNAC06G00310D PROTEIN 15 359 - -
Adu06g03184 361 Coils Coil 196 216 - -
Adu06g03184 361 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 359 IPR027725 -
Adu06g03184 361 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g03184 361 MobiDBLite consensus disorder prediction 276 303 - -
Adu06g03184 361 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g03184 361 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g03184 361 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g03184 361 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g03184 361 Gene3D - 18 117 IPR036388 -
Adu06g03184 361 SUPERFAMILY "Winged helix" DNA-binding domain 23 115 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03184 Adu-Chr6 110111522 110112891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03184 10 358 HSF AT1G46264 55.956 1.06e-114 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Adu06g03184 HSF_DNA-bind 2.7e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03184 06 110111522 110112891 Adu06g03184 06 110111522 110112891 ECH
Adu06g03184 06 110111522 110112891 Adu08g00369 08 6480889 6482715 PCT