Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03175 ATGGAACAAGAAGAAGAACCACAACAAAATGAGCCACCTCACTCTCACTCTCAATCTCGGTGCGTGACGCTACCTCCCGGTTGCCGGTTCCATCCTTCGGAGGAGCTTCTATTGAGTTACTACCTCACCAACAAAAATGGCACGGGGAACTGGAATGGTAACGGTGGTTTGGGATTCGATGGTTCTGATTTGATTCGGGAGCTGGATTTTTACGATTACGATCCTTTTGAACTTCCGGATTTTGCGTGCTTTGCGTACGGCTACGGCGGGAGGAGGAGGCACTGGTACTGTTTCACCACCGTTAGGGTTTCGAGGGGAGAGAGGTGGAAGAGGAAGAGGAAGGTTAAGAGTGGGTTCTGGTTGAAGAGGGGAAGGGTTTCGAATGTTAACGGTGTTGGGGAGAACGTGGTTTTGGGAACGAGGACAAGGTTCGTTTTCTATATGGGTGATTCGGCGAAGAACGGTGCCAGGACGGATTGGGTTTTGTATGAATACGCATTGGTTGATCATGTTATGGCCTCTTTTGTTCTTTGCCGGGTATTTAGTAAGCCTCGTTATAAGAATAGTGCATCAGACATCGGCCTGAGTTGTTGTGCAGAAGAGAGTGTATCAGCAGTGCGCCATATTGGTATTCAGCATGATGAACATGTTAAATTGGATGCCGTTGAAGCTAAAGTATGTGATGATATCTCCATTGACCACAACAATGAAATATGTGCTGGTGGAAACAGCGATAATCAAGTTAAGAATGCACATGACATAGATGCTTTACGATGTTTGGCGGCTCCTCAGGGCAGTCAGCAGCTATCAATTGCAAACTTCTACGTCAGCAATAATCTGAAAAGTGTAGTCAGAAATGGGGCTATCAGTGTCGGGGAGTCATTTAGCGTTTCTATCTTCTTTACAATTACCTTCCCCCTTTTTAGATTTGCTAGATTTGAGAACTCATTCATATGTTATTGGTTGCGTGCCCCTTTTTTTCCCTGCTAA 990 0.4566 MEQEEEPQQNEPPHSHSQSRCVTLPPGCRFHPSEELLLSYYLTNKNGTGNWNGNGGLGFDGSDLIRELDFYDYDPFELPDFACFAYGYGGRRRHWYCFTTVRVSRGERWKRKRKVKSGFWLKRGRVSNVNGVGENVVLGTRTRFVFYMGDSAKNGARTDWVLYEYALVDHVMASFVLCRVFSKPRYKNSASDIGLSCCAEESVSAVRHIGIQHDEHVKLDAVEAKVCDDISIDHNNEICAGGNSDNQVKNAHDIDALRCLAAPQGSQQLSIANFYVSNNLKSVVRNGAISVGESFSVSIFFTITFPLFRFARFENSFICYWLRAPFFPC 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03175 329 Gene3D NAC domain 33 187 IPR036093 GO:0003677|GO:0006355
Adu06g03175 329 SUPERFAMILY NAC domain 20 183 IPR036093 GO:0003677|GO:0006355
Adu06g03175 329 MobiDBLite consensus disorder prediction 1 21 - -
Adu06g03175 329 Pfam No apical meristem (NAM) protein 25 167 IPR003441 GO:0003677|GO:0006355
Adu06g03175 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 21 250 - -
Adu06g03175 329 ProSiteProfiles NAC domain profile. 24 183 IPR003441 GO:0003677|GO:0006355
Adu06g03175 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 21/22-LIKE ISOFORM X1 21 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03175 Adu-Chr6 110005902 110009999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03175 23 184 NAC Transcription Factor Family AT1G71930 31.737 1.57e-20 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu06g03175 NAM 2.2e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03175 06 110005902 110009999 Adu06g03175 06 110005902 110009999 ECH