Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03172 ATGAAGGTGCATCAATTCACACGTGGATTATGGGAGCATGAACCTTCTCTCACGCTTGGGTGCAAAAGATTACGCCCTCTTGCTCCTAAGCTTAGTACCTCTTCTTCTTCTAATAATAATAATAATAATTCTCCTTCTTCTTCTTCTTCTCTTGCTTCTTTTGATCTTAAGAGCTTCATTAGACCTGAAATTAGCAAACTTGGATCATCATCCTCTTCTGATGATGATAACAACATCAACAACAATAATAATATTATTAAGAGGGATCCACCTTCATCATCACCACCAGGGAGCCAGGTGGAAACACATCCAGGAGGAACAAGGTGGAACCCTACACAAGAACAGATAGGGATACTTGAGATGCTTTATAGAGGTGGAATGAGAACACCAAATGCTCAACAAATAGAACAGATCACTGCTCAATTAGGCAAATACGGCAAGATTGAGGGTAAAAATGTCTTTTATTGGTTCCAAAACCACAAAGCACGTGAGAGACAAAAACAGAAGCGTAACAGCCTTGGACTTTCTCATACTCCTAGAACTCCGGCCGCCGTCGCCGTCGCCGCCGCAACCACAACAATAGTGTCTTCACCCACCTTTGCTGCTAGCTTAAGTTTTGAGACCTCAAGGGGAGAAGTAATTGAAAGAGATCATGAAGATAGTCCTTACAAGAAGTGTAGGAGTTGGGTATTTGAGTATATGGAAGATCAAAGTTGGTCATCATCATCATCATCCAGCAAAGAGGAGGAACATAAAACCCTAGAGCTTTTCCCATTGCACCCGGAGGGCAGATGA 795 0.4226 MKVHQFTRGLWEHEPSLTLGCKRLRPLAPKLSTSSSSNNNNNNSPSSSSSLASFDLKSFIRPEISKLGSSSSSDDDNNINNNNNIIKRDPPSSSPPGSQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHTPRTPAAVAVAAATTTIVSSPTFAASLSFETSRGEVIERDHEDSPYKKCRSWVFEYMEDQSWSSSSSSSKEEEHKTLELFPLHPEGR 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03172 264 MobiDBLite consensus disorder prediction 30 51 - -
Adu06g03172 264 Gene3D - 106 173 - -
Adu06g03172 264 SUPERFAMILY Homeodomain-like 101 172 IPR009057 -
Adu06g03172 264 ProSiteProfiles 'Homeobox' domain profile. 102 167 IPR001356 GO:0003677
Adu06g03172 264 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 264 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Adu06g03172 264 MobiDBLite consensus disorder prediction 235 264 - -
Adu06g03172 264 Pfam Homeodomain 107 166 IPR001356 GO:0003677
Adu06g03172 264 MobiDBLite consensus disorder prediction 66 111 - -
Adu06g03172 264 CDD homeodomain 107 168 IPR001356 GO:0003677
Adu06g03172 264 SMART HOX_1 104 171 IPR001356 GO:0003677
Adu06g03172 264 MobiDBLite consensus disorder prediction 245 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03172 Adu-Chr6 109992361 109994979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03172 1 173 Wox Gene Family AT1G46480 61.453 7.34e-65 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Adu06g03172 Homeodomain 6.7e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03172 06 109992361 109994979 Adu06g03172 06 109992361 109994979 ECH