Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03171 ATGGAAGATAGGAATTATTTTTGTTCTACAAACTCATCGACAATAAGTCGGAATAGAAACAATAGAGGTAGAAGTAGAAGTAGAAGCAGAAGTCCTAGTAAGACGAAATCAAAAATTAAAAAAGAAAAATCAAACAAACCCTATAGAGGGATAAGGATGAGGAAGTGGGGAAAATGGGTGGCGGAGATTAGAGAACCTCACAAGAGGTCAAGAATATGGTTAGGCTCGTACATTACACCGGTAGCGGCCGCGCGAGCATACGACACGGCCGTGTTTTACCTCCGGGGCCCCTCGGCCCGGCTCAACTTCCCGGAGTTGTTGTTTCAAGATGAAGGAAACAAGGATGGTGGTTGTTTGGCACCAGAATGCGACATGTCAGCAGATTCCATACGCAAAAGAGCAACACAAGTTGGAGCAAGAGTAGATGCTCTCCAAACAGCACTTAATCATGCATCTTCCAACAATAATAGTAGTAATAATATTAATAATTATTGTTTATCATCAACTTCCTCTCTCCTTCAGAAACCTGATTTAAATGAGTTTCCTAAACCTGATGATGAAGGAGATTCTCTTGCTTTCTAG 582 0.4158 MEDRNYFCSTNSSTISRNRNNRGRSRSRSRSPSKTKSKIKKEKSNKPYRGIRMRKWGKWVAEIREPHKRSRIWLGSYITPVAAARAYDTAVFYLRGPSARLNFPELLFQDEGNKDGGCLAPECDMSADSIRKRATQVGARVDALQTALNHASSNNNSSNNINNYCLSSTSSLLQKPDLNEFPKPDDEGDSLAF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03171 193 MobiDBLite consensus disorder prediction 1 20 - -
Adu06g03171 193 MobiDBLite consensus disorder prediction 1 47 - -
Adu06g03171 193 CDD AP2 48 106 IPR001471 GO:0003700|GO:0006355
Adu06g03171 193 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 11 187 - -
Adu06g03171 193 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 11 187 - -
Adu06g03171 193 Gene3D AP2/ERF domain 46 105 IPR036955 GO:0003700|GO:0006355
Adu06g03171 193 MobiDBLite consensus disorder prediction 21 47 - -
Adu06g03171 193 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
Adu06g03171 193 Pfam AP2 domain 48 96 IPR001471 GO:0003700|GO:0006355
Adu06g03171 193 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Adu06g03171 193 SUPERFAMILY DNA-binding domain 47 105 IPR016177 GO:0003677
Adu06g03171 193 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Adu06g03171 193 PRINTS Ethylene responsive element binding protein signature 86 106 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03171 Adu-Chr6 109973532 109974344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03171 46 189 AP2-EREBP Transcription Factor Family AT2G23340 59.184 1.62e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu06g03171 AP2 6.3e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03171 06 109973532 109974344 Adu06g03171 06 109973532 109974344 ECH