Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03170 ATGAAGTCTCTCACAGTCACAGCCAGTGTTTTGAACCCCACAAATCAAACACCAATCAACAAACTCCACTTCTTCCACTCTCACTCTCTCTCATTCTCATTCTTCTTCCCACACACATCATCAAACCTGAAATGCCACCATCAAAAGCGAATCATCACAGCATGCTCTTCTTCTTCTTCTTCTTCTTCGATCGAAATCGACATGGTGAAGAACAACCAAGGAATCTACACCCCTAAGCACCCCAAAGTAGTCGTCCTCTGGGACCTCGACAACAAGCCCCCACGAGGACCCCCATACGACGCCGCACGCTCCCTCACGCGCCTCGCAACTCACCTCGGCCACGTCGTCGACATCTCCGCCTACGCCAATCGCCACACATTCATCCACCTCCCGCAGTGGGTCCTACAGGATCGCCGCCAGAGAAAGCACCTCGACGTGCTGGAACGGAAGGGACTGGTGGTGCCGTCGGAGCCCTACAGGTGTTCCGTCTGCGGGAGAAAGTGTCGCACCAATCTGGATCTGAAGAAGCATTTCAGGCAGTTGCATGAACGAGAGAGGCAGAAGAAGCTTAATCGGATGAGGTCCTTGAAAGGGAAGAAACGGCAGCGTTTTAAAGAGAGGTTTATTCAGGGGAATGAAAAGTATAATGAGGCTGCTAGGTCTCTCATCAGGCCCAAGATTGGTTATGGGCTAGCTTCAGAGCTGAGGAGGGCTGGGGTATATGTGAAGACTGTGGAGGATAAGCCTCAGGCTGCAGATTGGGCATTGAAGAGGCAGATGCAGCACTCAATAACCAGGGGGATTGATTGGCTGGTTTTGGTCTCAGATGATTCGGATTTCGCAGAGATGTTGAGGAGAGCAAAAGAGAGGGATTTGGGGACAGTGGTGGTTGGGGATTGGGATAGGGCACTGGGGAGGCACGCCGATTTGTGGTTTCCCTGGATTGATGTTGAGAATGGGAATGTCTCGGAGAAGGATCTGGTGATCGAGAAGAACAGGAGTAGGGCTCGAAGTGACGGTTTTGTCGTGGAAGAAGATGATGATGGGTTTTTTTCATTGTCGAGGTTTGACAGTGGTG 1078 0.5139 MKSLTVTASVLNPTNQTPINKLHFFHSHSLSFSFFFPHTSSNLKCHHQKRIITACSSSSSSSSIEIDMVKNNQGIYTPKHPKVVVLWDLDNKPPRGPPYDAARSLTRLATHLGHVVDISAYANRHTFIHLPQWVLQDRRQRKHLDVLERKGLVVPSEPYRCSVCGRKCRTNLDLKKHFRQLHERERQKKLNRMRSLKGKKRQRFKERFIQGNEKYNEAARSLIRPKIGYGLASELRRAGVYVKTVEDKPQAADWALKRQMQHSITRGIDWLVLVSDDSDFAEMLRRAKERDLGTVVVGDWDRALGRHADLWFPWIDVENGNVSEKDLVIEKNRSRARSDGFVVEEDDDGFFSLSRFDSG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03170 359 PANTHER OS06G0166200 PROTEIN 7 357 - -
Adu06g03170 359 CDD PIN_LabA-like 169 299 - -
Adu06g03170 359 Gene3D - 76 316 - -
Adu06g03170 359 ProSiteProfiles Zinc finger C2H2 type domain profile. 159 187 IPR013087 -
Adu06g03170 359 PANTHER - 7 357 - -
Adu06g03170 359 Coils Coil 179 199 - -
Adu06g03170 359 ProSitePatterns Zinc finger C2H2 type domain signature. 161 182 IPR013087 -
Adu06g03170 359 SMART c2h2final6 159 182 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03170 Adu-Chr6 109967097 109968808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03170 20 354 C2H2 Transcription Factor Family AT5G52010 66.766 4.13e-160 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu06g03170 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03170 06 109967097 109968808 Adu06g03170 06 109967097 109968808 ECH