Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03158 ATGGCTTCATCCTTCACCATCCTCCTCTTCTTCTTCACTCTCTTCACTCTTTCATATGCATCAGACATGTCCATAATCTCGTACGACAAAACCCACTCCAACACATGGAGAACCGATGAGGAAGTCATGGCTATGTACGAGGAATGGCTTGTGAAGCATGGAAAGAAACCAAGTAACGGTCTCTTGAGTGGTGAGAGCAAGAATCGGTTCGAGATCTTTAAGGATAACCTCCGGTTCATTGATGAACAGAACAGTTTACCGAACCGGACTTTCCAGCTCGGTCTGAACCGGTTCGCCGATCTGACCAACGAGGAGTACAGGGCTAAGTATTTGGGTACCAGGATGGATCCTAACCGTCGGATGATGAAGGCTAAGACCAGGAGCAACCGATACGCGCCACGTGTCGGGGACAAGTTGCCGGAGAGTGTTGATTGGAGGAAGGAAGGTGCTGTTGTTGGAGTCAAAGACCAAGGAGGATGTGGGAGTTGTTGGGCATTCTCAACAATTGCTGCAGTGGAAGGAATAAACAAGATCGTAACAGGGGATCTGATTTCACTGTCAGAGCAAGAACTTGTGGACTGTGATACATCATACAATGAAGGGTGTAATGGTGGACTCATGGACTATGCCTTTGAGTTCATCATCAACAATGGTGGCATTGACTCTGAAGCCGATTACCCTTACACTGGCTATGATGGCATATGTGACCAAATCAGGAAAAATGCTAAGGTTGTGAAGATTGATAGCTATGAAGATGTTCCTGCCTATGATGAATTGGCATTGAAAAAGGCCGTTGCCAATCAGCCCGTGGCAGTTGCCATTGAAGGAGGTGGCAGGGAATTCCAGTTATATGTATCTGGTGTATTCACAGGAAAATGTGGAACAGCATTGGACCATGGAGTTGCTGCTGTAGGGTATGGGTCAGAAGGTGGGCATGAGTATTGGATTGTGAGGAACTCATGGGGAGCTAGCTGGGGAGAGGACGGTTACATCCGAATGGAGCGGAATCTTGGTAACAGCAGAGCAGGCAAGTGTGGAATCGCCATCGAGCCTTCTTACCCTATTAAGAATGGCCCCAATCCTCCTAACCCCGGACCATCTCCACCGTCGCCTGTGAGGCCGCCGTCGGTGTGTGATAACTACTTCAGCTGCCAATCTGGAAACACATGCTGCTGCCTTTTCCAGTTTGGAAATGCATGCTTTGAATGGGGATGCTGCCCTCTTGAAGGTGCTACCTGCTGTGATGATCACTACAGCTGCTGTCCTGCCGACTACCCCGTTTGTGACACTTACAGAGGTCTTTGCCTCAAGAACAAGAACAACCCATTCGGAGTGAAGGCGTTGAAGAGAACTGCAGCTAAACCTCACTGGGCCTTCAATGGTGTGAGCAGTGCTTAG 1398 0.4886 MASSFTILLFFFTLFTLSYASDMSIISYDKTHSNTWRTDEEVMAMYEEWLVKHGKKPSNGLLSGESKNRFEIFKDNLRFIDEQNSLPNRTFQLGLNRFADLTNEEYRAKYLGTRMDPNRRMMKAKTRSNRYAPRVGDKLPESVDWRKEGAVVGVKDQGGCGSCWAFSTIAAVEGINKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDSEADYPYTGYDGICDQIRKNAKVVKIDSYEDVPAYDELALKKAVANQPVAVAIEGGGREFQLYVSGVFTGKCGTALDHGVAAVGYGSEGGHEYWIVRNSWGASWGEDGYIRMERNLGNSRAGKCGIAIEPSYPIKNGPNPPNPGPSPPSPVRPPSVCDNYFSCQSGNTCCCLFQFGNACFEWGCCPLEGATCCDDHYSCCPADYPVCDTYRGLCLKNKNNPFGVKALKRTAAKPHWAFNGVSSA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03158 465 SMART Inhibitor_I29_2 46 106 IPR013201 -
Adu06g03158 465 Gene3D Granulin 376 438 IPR037277 -
Adu06g03158 465 Pfam Cathepsin propeptide inhibitor domain (I29) 46 106 IPR013201 -
Adu06g03158 465 Pfam Papain family cysteine protease 139 355 IPR000668 GO:0006508|GO:0008234
Adu06g03158 465 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 157 168 IPR000169 -
Adu06g03158 465 SMART GRAN_2 378 435 IPR000118 -
Adu06g03158 465 PANTHER CYSTEINE PROTEASE 28 384 - -
Adu06g03158 465 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 297 307 IPR025660 -
Adu06g03158 465 SMART pept_c1 139 355 IPR000668 GO:0006508|GO:0008234
Adu06g03158 465 Pfam Granulin 389 436 IPR000118 -
Adu06g03158 465 Gene3D Cysteine proteinases 19 357 - -
Adu06g03158 465 SUPERFAMILY Granulin repeat 375 409 - -
Adu06g03158 465 CDD Peptidase_C1A 140 354 IPR039417 -
Adu06g03158 465 SUPERFAMILY Cysteine proteinases 37 355 IPR038765 -
Adu06g03158 465 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 28 384 - -
Adu06g03158 465 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 314 333 IPR025661 -
Adu06g03158 465 PRINTS Papain cysteine protease (C1) family signature 157 172 IPR000668 GO:0006508|GO:0008234
Adu06g03158 465 PRINTS Papain cysteine protease (C1) family signature 299 309 IPR000668 GO:0006508|GO:0008234
Adu06g03158 465 PRINTS Papain cysteine protease (C1) family signature 314 320 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03158 Adu-Chr6 109793829 109798046 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03158 06 109793829 109798046 Adu01g01018 01 15374982 15378284 ECH
Adu06g03158 06 109793829 109798046 Adu03g00521 03 4854884 4856848 ECH
Adu06g03158 06 109793829 109798046 Adu06g03158 06 109793829 109798046 ECH