Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03108 ATGAGTGATTTACAATGGAAGAAGGTGGAGGTCTTGGGAGCAGGTTCTTATGGCACTGTTTATCTTGGCATTCTTGTTGATGAACAAAAACGGTTTCATAGCTTCATTGCTGTGAAGAGCTCTATTCCCAAACTGGCATTCTCACTGAAGAAAGAGGAACAGATTTTTAAATCAGTTTGGGAAGGTGAAAGCAGTGGTTGCCAAGAAATCATTCAATGCTTTGGAACTGAAACCACAGTAGAGCATGGACGTTGCTTTTACAATCTTTTCTTGGAATATGCTCCTCACGGTTCTTTGGCTGACTTGATCCACACGAAACCTCTTCCCGAGACCGAGGTGAGTGTCTATGCACGCATGATTGTTAAAGAGCTTTCGCATATTCATCGCAAAGGAATCGTCCACTGTGACCTCAAGCCGGAGAACATTCTTGTGTTTCCTTCATTGGATAAAGAGATTGCAAACTATCAATTGAAGATTGCGGATTTTGGATTATCGAAAACCAAAGAGGAGGAAGCAGATGTTGAGTTGTGGAAGTCCAAGCCGAGAGGTACGCCATTATACTTGTCACCGGAAGCGTTTTCTGGTCATATTGATGCTCCGATGGATATATGGGCACTTGGTTGCATAGTGATTGAAATGCTCACTGGATTGCCTGCCTGGGGTGAGAGCCCTTTGCTTATTGAGGAGTTGAGCAACGACCAACAACCCCAACACTCCCTCGCGATTCCCGAGGACGACCTCGGCGTTAAGCGCGTGAGGGACCTCAAGAAGCGGAAGCGCGAGGAGCCTGTTGCTTCGGGGACTCTCAGGATCTGGAATCCTGAGTTCGTTGAAGAAGAAGATGAGGAAGGCGAGGGTGTGGTTGAGAAGAGGGTTTGGGAGTGGAGGAAGAGGTTGGTGGAGAAGATGAACGGGATTGAGCTGAATCTTGAAGGGGTTAAGTTCAAGCTTGATGTTGCTGTTCCCGATTCGGATGATTTTGAGGCAATGAAGAAAGATTGGGAACAGTTTTTTGCGTTTGATACTCGAGAAATCTTAATGTTGCTGAGGACGATGATCCAGGTAAGGATGCAAATGAAGACATCGGAGACCTGGTTTCAGGCCTTTACTTGTAAGATTGTGGTTCAGTTTGAAAAATATAGAGACTTCCATGATGCATTGAGAGTTCTATGTGGTCGCTCATTGCAAAAGCAAGGATCGCGATTAAAGGCTGATTATGAAGTTAGCTGGGATAGAGATGGATTTTTTCGGAACACAAGAAATCAAACACAAGAAAAGACCAACAGAGTGTCAACAATGGCAGCAGATCATTACAAAAGTGAAGCTCCTAGACGCCATACCCCTTATGCTCGCCACAGCCAGAGAATGTGCGACCAAGGAGATTCCGGGTTAGATTTTGATATCTCAAATGACTCTTATGATTGTCCCTAG 1431 0.4507 MSDLQWKKVEVLGAGSYGTVYLGILVDEQKRFHSFIAVKSSIPKLAFSLKKEEQIFKSVWEGESSGCQEIIQCFGTETTVEHGRCFYNLFLEYAPHGSLADLIHTKPLPETEVSVYARMIVKELSHIHRKGIVHCDLKPENILVFPSLDKEIANYQLKIADFGLSKTKEEEADVELWKSKPRGTPLYLSPEAFSGHIDAPMDIWALGCIVIEMLTGLPAWGESPLLIEELSNDQQPQHSLAIPEDDLGVKRVRDLKKRKREEPVASGTLRIWNPEFVEEEDEEGEGVVEKRVWEWRKRLVEKMNGIELNLEGVKFKLDVAVPDSDDFEAMKKDWEQFFAFDTREILMLLRTMIQVRMQMKTSETWFQAFTCKIVVQFEKYRDFHDALRVLCGRSLQKQGSRLKADYEVSWDRDGFFRNTRNQTQEKTNRVSTMAADHYKSEAPRRHTPYARHSQRMCDQGDSGLDFDISNDSYDCP 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03108 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Adu06g03108 476 SUPERFAMILY Protein kinase-like (PK-like) 6 224 IPR011009 -
Adu06g03108 476 SMART serkin_6 6 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g03108 476 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 236 - -
Adu06g03108 476 Pfam Protein kinase domain 7 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g03108 476 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Adu06g03108 476 Gene3D Transferase(Phosphotransferase) domain 1 101 283 - -
Adu06g03108 476 Gene3D Phosphorylase Kinase; domain 1 2 100 - -
Adu06g03108 476 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 236 - -
Adu06g03108 476 ProSiteProfiles Protein kinase domain profile. 6 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03108 Adu-Chr6 109222098 109224979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03108 4 245 MAP Kinase Kinase Kinase AT4G36950 41.339 7.85e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Adu06g03108 Pkinase 1.2e-38 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03108 06 109222098 109224979 Adu06g03108 06 109222098 109224979 ECH