Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu06g01991 | ATGGACCCAGAGCAAGAAATGAGTTCCTCAGATTCAAGGGATGATAAAAAAGGTTCGCAACATAATGATGAAGCAACAAATGAAGAAGACAAAACCATGAAGAAACCAGACAAGATTATTCAGTGTCCAAGATGCAAGAGCATGGACACAAAATTCTGTTACTTCAATAACTACAACGTCAACCAACCGCGCCATTTCTGCAAGAACTGCCAGCGCTACTGGACAGCCGGCGGAACAATGAGGAATGTCCCCGTTGGCGCCGGCAGAAGGAAGCACAAGCACTTGGCTTCACAGTTCCGCAGTGTCCTAGTAGCCGCGGCCGCAGCCGCAGCCGCAGCCGCGGCCACCCGAGTTCCAGAATCCACAAATTCGTCGTCAAAAAATAATAATAGTGACAATGCTAGTGGTACCGTGTTGGAATTTTGCCAGGAAAGAGGAATTGTGAATGAAAATTCGTCTATCATTTATTGTACTGAATCTGAGGAGGAATCATTATCGTTGTGTACTAACAATAATAATGAATCTTCTTCAGAAAACAACAACAACAACGCATCAAAATTGTTGCAATATTACCCTGTTCCTCCATGGGTTATGCCTTGGAACAATGTTGTTCCACAACATGGTCCAAACTCAATTCAATGGTGTCCAACACCAATGGTGGCAGCAGCAACAATTCCAGTTCATCTTGTTCCAGGGCCATGCTGGGGTGGAACACCTGTGTGGGTCGCACCTGGACCTGCACCGGGGAATGTGTCAATAGGATCCAATCATAGCCGTTCATCGCCTTCTTCGTCCACTAGTAATAACAATAGCTGCTATTCCGGCAACGGGAATTCTCCAATACTTGGCAAGCATAGTAGAGATCACAGTACTGTTTTCATTGATGAACAGAAATCAAGTAAATGTTTCTTGGTTCCGAAGATTCCGAGAATTGATGAGCAAAATAATAATGAGGCTTCAGTAAGTCCTATTTGGGCTACATTGGCATGA | 990 | 0.4455 | MDPEQEMSSSDSRDDKKGSQHNDEATNEEDKTMKKPDKIIQCPRCKSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKHKHLASQFRSVLVAAAAAAAAAAATRVPESTNSSSKNNNSDNASGTVLEFCQERGIVNENSSIIYCTESEEESLSLCTNNNNESSSENNNNNASKLLQYYPVPPWVMPWNNVVPQHGPNSIQWCPTPMVAAATIPVHLVPGPCWGGTPVWVAPGPAPGNVSIGSNHSRSSPSSSTSNNNSCYSGNGNSPILGKHSRDHSTVFIDEQKSSKCFLVPKIPRIDEQNNNEASVSPIWATLA | 329 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu06g01991 | 329 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Adu06g01991 | 329 | MobiDBLite | consensus disorder prediction | 252 | 286 | - | - | |
Adu06g01991 | 329 | ProSitePatterns | Zinc finger Dof-type signature. | 42 | 78 | IPR003851 | GO:0003677|GO:0006355 | |
Adu06g01991 | 329 | PANTHER | CYCLIC DOF FACTOR 3-LIKE | 9 | 328 | - | - | |
Adu06g01991 | 329 | PANTHER | CYCLIC DOF FACTOR 2 | 9 | 328 | IPR045174 | GO:0003700|GO:0006355 | |
Adu06g01991 | 329 | MobiDBLite | consensus disorder prediction | 252 | 285 | - | - | |
Adu06g01991 | 329 | Pfam | Dof domain, zinc finger | 37 | 94 | IPR003851 | GO:0003677|GO:0006355 | |
Adu06g01991 | 329 | ProSiteProfiles | Zinc finger Dof-type profile. | 40 | 94 | IPR003851 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu06g01991 | Adu-Chr6 | 84250889 | 84253213 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu06g01991 | 4 | 329 | C2C2-Dof Transcription Factor Family | AT3G47500 | 34.722 | 2.67e-48 | 166 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Adu06g01991 | zf-Dof | 2.4e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu06g01991 | - | - | ahf:112696882 | 549.28 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu06g01991 | 06 | 84250889 | 84253213 | Adu06g01991 | 06 | 84250889 | 84253213 | ECH |