Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01330 ATGAGCTGCTTCTCTTGCCTTGTTGATGATGATCACCACGGGAAGCATGGGCCCGGGGAGATGAACAGAATGGAATTATTAATTGAGAACTACTTTAAGAAGAATAATACAGGGAGAGGGCGGAAGAAGAAGAAGCAGGATCGGGGTGAAAGCAAGACAGACGCTGCCATCAGCTTTGGTTTTCGGGAGCTTGAATGGGCAACCGACACTTTCAAGGAAGCCAACTTGATTGGGGAAGGCGGTTTTGGAAGGGTTTACAAGGGTCGTCTCTTGACAGGCCAGGTGGTTGCTGTAAAACAATTAAATCATGACGGGCATCAAGGTTTTCAAGAATTTGTGACAGAGGTGCTTATGCTTAGCCTCCTCCACCATTCTAATCTCGTTAACTTGATTGGCTATTGCACCGATGGTGAGCAGAGGCTGTTGGTGTATGAATATATGCCCATGGGTAGCCTTGAAGATCATCTTTTTGCAGATCCTACATTGAATAATAATAAGGAAGGAGGGCTAAGTTGGATAACTCGAATGAAAATCGCGGCCGGGGCTGCTCGTGGGCTGGAGTATCTCCATTGCAAAGCAAATCCACCTGTTATCTATCGCGACTTGAAATCGGCGAATATCTTATTAGACAATGATTTCAACCCAAAACTCTCAGATTTTGGGCTCGCCAAGCTAGGGCCTGTTGGAGACAACACCCATGTTTCCACCAGAGTCATGGGAACGTACGGCTACTGCGCCCCCGAATATGCCATGAGTGGAAAATTAACTCTTAAATCCGATATTTACAGCTTTGGTGTTGTCTTGCTCGAGTTGATCACTGGTCGTAAGGCCATGGATTTCACTAGAAAACAAGGCAGCCAAAACTTAGTTTCATGGGCTCGTGCTTTCTTAAGTGACAGGAAAAAGTTTAGGCAAATGGTTGACCCTCGATTGCGGGGAAGCTATCCTGTGCGTTGCATGCATCATGCGATTTGTATAACCGCAATGTGTCTGCAGGACCAACCAATTTTTCGTCCACATGTTCGTGATATTGTTGCTGCACTAGATTACATAGTTTCTCAGAGTATTCTTGAACTCGATAAGCATGGAAGACTGTCTGACACCAACTCATCACAACAAGAACCACAACCGCAAATTGCCACAAGTTAA 1149 0.4543 MSCFSCLVDDDHHGKHGPGEMNRMELLIENYFKKNNTGRGRKKKKQDRGESKTDAAISFGFRELEWATDTFKEANLIGEGGFGRVYKGRLLTGQVVAVKQLNHDGHQGFQEFVTEVLMLSLLHHSNLVNLIGYCTDGEQRLLVYEYMPMGSLEDHLFADPTLNNNKEGGLSWITRMKIAAGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDFTRKQGSQNLVSWARAFLSDRKKFRQMVDPRLRGSYPVRCMHHAICITAMCLQDQPIFRPHVRDIVAALDYIVSQSILELDKHGRLSDTNSSQQEPQPQIATS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01330 382 SUPERFAMILY Protein kinase-like (PK-like) 56 348 IPR011009 -
Adu06g01330 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Adu06g01330 382 Gene3D Transferase(Phosphotransferase) domain 1 147 370 - -
Adu06g01330 382 SMART serkin_6 71 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g01330 382 ProSiteProfiles Protein kinase domain profile. 71 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g01330 382 CDD STKc_IRAK 77 349 - -
Adu06g01330 382 PANTHER OS07G0668900 PROTEIN 40 358 - -
Adu06g01330 382 PANTHER OS07G0668900 PROTEIN 40 358 - -
Adu06g01330 382 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Adu06g01330 382 Pfam Protein kinase domain 72 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g01330 382 Gene3D Phosphorylase Kinase; domain 1 41 146 - -
Adu06g01330 382 PIRSF ILK 22 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01330 Adu-Chr6 18252973 18254548 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Adu06g01330 Pkinase 6.5e-46 CL0016