Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01296 ATGGTGAGTGTTGTTGCCTTGGTTTTCTTGGGCACCATGTTTGCATTAGTAGCAGCAACAAATGGTGGACAGTATCCAGCATTATTTGCATTTGGAGATTCCATTCTTGATACCGGAAATAACAACAACCTTGCAACTTTAACCAAGTCTAATTTTCCTCCTTACGGAAGAGATTTTATTGGAGGAAAACCAACAGGAAGATTCTGTGATGGGAAAGTCCCATCAGATCTTATAGCGGGAGATCTTGGAATCAAAGGCACGTTACCTGCATATCTTGATCCAAATTTGCGGAATGAAGATCTTTCCACGGGTGTAAGCTTTGCCTCAGGTGGAACAGGAAATGATGATCTCACCGCTCAAACACAGCAGGGTGCTTTATCACTATCGACACAAATGAAAAATTTCCAAGAGTGCATAGGAAGGCTAAAAGCATTTATGGGAGAAGAAAGAGCGAACTACATAATATCAAACAGCTTGTATCTGCTTTCATCAGGAAACAATGATATTGCCCTCACTTATTCTTCACCACTCAGAAGCAGCATTCCTTTCCCTTTATACGCTTCTCAATTAGTTGGCTGGACCTCGGATTTTCTCAAGCAACTATACGATGCCGGAGCAAGAAAAGTGTGGGTTCTGAGTACATTGCCATTGGGGTGCTTGCCGGGAGGTAGAACTGTAGCAGGAGGTCCTTTAAGATTGTGTTCTGATACTGTTAATAGAGAAGCTCAATTATTCAATGATCAATTAGCATCGGCTGTTAGTTCTTTACAAGGCACACTTTCTGGTTCTGCCTTTCAATTCATTGATATCTATGCTACACTGCTCAATATCATACAAAATCCTTTTAGCTCAGGGTTTCTAAATGTTGCAAATGGATGTTGTGGGACTGGACTGGTTGAGATTGGAGAGACATGTAAGTTAGCCCTTGGTTCCTGCCCAAATCCTGCAGCATATGTTTTCTGGGACGCTGGTCATCCAACTCAAAGAGCCTATGAGCTCATAGTCTCTTCTATACTGCCAAAATAG 1026 0.4191 MVSVVALVFLGTMFALVAATNGGQYPALFAFGDSILDTGNNNNLATLTKSNFPPYGRDFIGGKPTGRFCDGKVPSDLIAGDLGIKGTLPAYLDPNLRNEDLSTGVSFASGGTGNDDLTAQTQQGALSLSTQMKNFQECIGRLKAFMGEERANYIISNSLYLLSSGNNDIALTYSSPLRSSIPFPLYASQLVGWTSDFLKQLYDAGARKVWVLSTLPLGCLPGGRTVAGGPLRLCSDTVNREAQLFNDQLASAVSSLQGTLSGSAFQFIDIYATLLNIIQNPFSSGFLNVANGCCGTGLVEIGETCKLALGSCPNPAAYVFWDAGHPTQRAYELIVSSILPK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01296 341 CDD SGNH_plant_lipase_like 26 341 IPR035669 -
Adu06g01296 341 Pfam GDSL-like Lipase/Acylhydrolase 28 336 IPR001087 GO:0016788
Adu06g01296 341 SUPERFAMILY SGNH hydrolase 30 340 - -
Adu06g01296 341 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 28 39 IPR008265 GO:0006629|GO:0016298
Adu06g01296 341 Gene3D SGNH hydrolase 16 340 IPR036514 -
Adu06g01296 341 PANTHER GDSL ESTERASE/LIPASE EXL3 2 339 - -
Adu06g01296 341 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01296 Adu-Chr6 17673570 17674954 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01296 06 17673570 17674954 Adu08g00173 08 2700737 2705645 PCT