Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01275 ATGGCCCTCCTAGCACTCTTGCCTGAACACTCCCTTCCCAACAACAACAATGGTAAGAATAAGATTAATAATAAGCAGAAGCAGAAACACAAGCAGAATCAAAAGCAGAAGCAGAAAGAAAAACAAGGTTCTTCTTCTTCATCTTCATGGGAGCAAATCAAGAACTTGATATCTTGCAAACAAGTTGAAGGGTCAAGAGTGCACGATCCTTCATCGTCAAAGAGCATGATGGGTTCATCTTGCAGCTCCATATGCAGCTTCAGAGATGTTGTTCATGGAAACACTAGAGTTGTTCACAGAGCTGATAACTCTTCACCTGAGAGTAGCTCACTTGGGCAGCAAGAAACTGGTTTGTTGAGTAGAAAACCTGCCGCAAAATCATCAAGAAGGTCATCTGGGAAATCCAATGGTGGAGCAACCTACACGCCATCATCTTCTAAAGGGATGCAGTTTAGGAAGCTGTCTGGGTGTTATGAATGTCACATGATCATTGACCCTAGCAGGCTACCAATTCCAAGGAGCAGCGTGTGTGCTTGTTCAGAGTGTGGAGAGGTGTTCCCTAAGATGGAAAGCTTAGAGCTTCATCAAGCTGTTCGTCATGCTGTTTGGGAGCTGGGTCCAGAGGATTCAGGTCGGAACATAGTGGAAATAATCTTCAAATCAAGCTGGCTAAAGAAGGACAACTCGATATGCAAGATCGAACGGATACTGAAGGTCCAGAACAGTCAACGCACCATCCAACGGTTTGAGGAGTGCAGGGACAGCGTGAAGTCGCGTGCACAGAATAGTAGCAAGAAAAACCCCAGGTGCGCAGCCGATGGCAACGAACTCTTGAGGTTCCATTGCACCACATTGACCTGCCCACTTGGGGCACAGGGATCCACTGCCCTTTGCACTGCCATTCCCGGTTGTGGCGTATGCACTGTCATAAGGCACGGGTTTCAAGGCGGTGGAAAGGGGGTGAAGACCACGGCCAGTAGCGGTAGGGCACATGACTCGCTGGCAGGGCATTGTGGCGCCCCAAGGGCAATGTTGGTTTGCCGTGTCATTGCTGGCAGGGTCAGGCGCGTGCCAGAGGACGCGCCGCCAGAGGACGACGGAGTCTCGGCTAGTGGGGGCTATGATTCTATTGCAGGCAGTGCCGGGATCTACTCTAACCTTGAAGAATTGGTTGTTTTCAATCCACGCGCCATCCTACCCTGTTTTGTGGTTGTTTACAAGGTGCTTTCTTGTTGA 1236 0.4943 MALLALLPEHSLPNNNNGKNKINNKQKQKHKQNQKQKQKEKQGSSSSSSWEQIKNLISCKQVEGSRVHDPSSSKSMMGSSCSSICSFRDVVHGNTRVVHRADNSSPESSSLGQQETGLLSRKPAAKSSRRSSGKSNGGATYTPSSSKGMQFRKLSGCYECHMIIDPSRLPIPRSSVCACSECGEVFPKMESLELHQAVRHAVWELGPEDSGRNIVEIIFKSSWLKKDNSICKIERILKVQNSQRTIQRFEECRDSVKSRAQNSSKKNPRCAADGNELLRFHCTTLTCPLGAQGSTALCTAIPGCGVCTVIRHGFQGGGKGVKTTASSGRAHDSLAGHCGAPRAMLVCRVIAGRVRRVPEDAPPEDDGVSASGGYDSIAGSAGIYSNLEELVVFNPRAILPCFVVVYKVLSC 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01275 411 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 33 410 - -
Adu06g01275 411 SUPERFAMILY ADP-ribosylation 202 407 - -
Adu06g01275 411 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 33 410 - -
Adu06g01275 411 ProSiteProfiles Zinc finger C2H2 type domain profile. 177 201 IPR013087 -
Adu06g01275 411 ProSitePatterns Zinc finger C2H2 type domain signature. 177 200 IPR013087 -
Adu06g01275 411 Coils Coil 22 42 - -
Adu06g01275 411 Gene3D - 202 408 - -
Adu06g01275 411 MobiDBLite consensus disorder prediction 1 50 - -
Adu06g01275 411 MobiDBLite consensus disorder prediction 60 79 - -
Adu06g01275 411 MobiDBLite consensus disorder prediction 99 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01275 Adu-Chr6 17339199 17342499 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu06g01275 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01275 06 17339199 17342499 Adu06g01275 06 17339199 17342499 ECH