Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01244 ATGAAGATCCAGTGCGACGTGTGTAGCAAGGACGAGGCATCGGTGTTCTGCACCGCCGATGAAGCCGCCCTATGCAACGGCTGCGACCACCGTGTCCACCATGCCAACAAGCTCGCATCCAAACACCAACGCTTCTCTCTTCTCCGTCTCTCCACAAAGCAAAACTTCCCTCTCTGTGATGTTTGCAAGGAGAGAAGGGCCTATGTGTTCTGCCAGCAAGATAGAGCGATTCTATGCAAAGATTGTGATATTCCAATTCATTCTGCAAATGAACACACAAAGAAGCATACTAGATTCCTTGTCACCGGTGTTAAACTCTCGGATTCTGCTAAACTCTATTCAGCCGCCACTACTCCTCCTCCTCCTCCTTTGATTGGAAGTAATAGTAGTAGTGACTCTAATTCCAAAGCTTCTCAGATTCCAAAATCTTTGGTATCTGAGCCGACTTCTTCAGCAGCATCAACGGGGCTTCCCCCAATTAAGGGAGGAAGCTTGGTTGGTGTTGCCGAAGAAGACGCTTCCACGAGTACTCGCAGCATATCTGAGTACTTGATAGAGACTATACCTGGCTGGCAAGTTGAAGACTTTCTTGATTCATCAACTGTTCCCTTTGGTTTCTCTAAGGGTGGTGATGAGATGTTTTCAGTGTTTGACGGTGAAATTGATGGAAATATGTATGCATTTTCAACAATGGAGAAGATGGGGATGTGGGTTCCTCAAGCACCGCCACCACCACCACCACCTCTTGTATATCCTTCACAATTTTGTGAGGCAAAAGATGTCACCAACAACAACATCAAAGGTAGCATCAGCAGATCAAGGTTGGGGGATGATAATTTCATTGTCCCTCAGATTAGTCTTCAATCCAACAACACCAAGAGACCAAGATATCTATGGTAG 900 0.4611 MKIQCDVCSKDEASVFCTADEAALCNGCDHRVHHANKLASKHQRFSLLRLSTKQNFPLCDVCKERRAYVFCQQDRAILCKDCDIPIHSANEHTKKHTRFLVTGVKLSDSAKLYSAATTPPPPPLIGSNSSSDSNSKASQIPKSLVSEPTSSAASTGLPPIKGGSLVGVAEEDASTSTRSISEYLIETIPGWQVEDFLDSSTVPFGFSKGGDEMFSVFDGEIDGNMYAFSTMEKMGMWVPQAPPPPPPPLVYPSQFCEAKDVTNNNIKGSISRSRLGDDNFIVPQISLQSNNTKRPRYLW 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01244 299 MobiDBLite consensus disorder prediction 127 157 - -
Adu06g01244 299 ProSiteProfiles Zinc finger B-box type profile. 54 101 IPR000315 GO:0008270
Adu06g01244 299 MobiDBLite consensus disorder prediction 113 163 - -
Adu06g01244 299 Gene3D Classic Zinc Finger 1 100 - -
Adu06g01244 299 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 296 - -
Adu06g01244 299 SMART bboxneu5 4 47 IPR000315 GO:0008270
Adu06g01244 299 SMART bboxneu5 54 101 IPR000315 GO:0008270
Adu06g01244 299 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 296 - -
Adu06g01244 299 CDD Bbox1_BBX-like 5 47 - -
Adu06g01244 299 Pfam B-box zinc finger 57 94 IPR000315 GO:0008270
Adu06g01244 299 CDD Bbox1_BBX-like 58 101 - -
Adu06g01244 299 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01244 Adu-Chr6 16806903 16809027 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu06g01244 zf-B_box 9.2e-07 No_clan