Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01237 ATGATAATGGTGTCTCCGATAATTTCCCCTCCTTCATCTTCATCTTCCACACTTCATCTTCATTCCTTCGAATCTACCTTCTTCTTCTCCACTCCCTTACTTCCACAAAGGAACATACGATTTCAAAGTAGATGCAATAAGTTTGAGAAGCATAGATGGAAAGATGCTGTACGGTGCAGATTTATCAGCTCCAATGCACCTTCAACTTCAACATCAAATTCAAATTCAATGACGTTGATGAAGGAACCTCACAAGTACTTTGACCAAGTTTTCATTACCGTTCGTGCTGGTGATGGTGGGCATGGAGCTATACTCAATGCCCCCAATACTCAAAGATCACCAACAAAACAAGACCAGAAGAAGGATAAGGACAAGATTAAGAAGAAAAGCTCCTTGAAGAGGGACTTTGATGGTTCACTCATACTCCCAATGGGTGGACATGGTGGTGATGTGGTTATCTACGCAGATGAGGGAAAGGACACATTGTTGGAATTTCACAACAAGGGAAGGTACAATGCTAAGCGTGGTGGAAATGTTGATGCAATGGGTGTGTTAAGTTCACTGTTGCGTAATGGAATCACGGCCCCAACTTTGCGCATTCCTGTGCCTGTAGGTACAGTTGTGAAAAACAAACGAGGGAAGACGTTGGCTGATCTAGCACAACCTGGCGATGAAGTTCTTGTAGCTAGGGGTGGACAAGGAGGGATTAGTTTGTTAGAAGTTCCACAGCATCAAAAGAAAAGGATGATGACTTTGACAACTAACGTGATGAGAGATGAATCTGATAAGGTATTAGTTCACGGTCAGCCTGGGGAAGAAATTAAATTGGAGTTGATCCTGCGAGTAGTTGCCGATGTTGGTCTAGTTGGACTTCCAAATGCTGGAAAATCGACACTTCTGGCAGCGATTACACTCGCAAAACCTGACATTGCTGACTATCCATTTACAACATTAATGCCAAACCTCGGCCGCCTTGGCGGTGATCCTACCTTAGGGGCAGGGATGTATTCATCTGAAGCTACGTTGGCAGATTTGCCTGGCCTTATAGAAGGAGCTCACTTAGGGAAGGGTCTTGGCCGCAATTTTTTGAGGCACCTGAGGCGGACTCGAGTGTTGGTTCATGTTGTTGATGCGGCCGCTGAGAACCCTATAAATGACTACAGAACTGTTAGAGAAGAGTTGCGCATGTATAATCCCGAGTACCTTGAAAGACCATACATTGTTGTTTTGAATAAGATTGACCTATCCGAGGCAAAGAACAGGCTTTCATCACTTTCTGAAGAAATTATGAAAATAGGCAACAATAGCACAGCTTCTGAACCGAAACCAAGTCCGGAAGTTCCGGATGAATCATCATCTGATGAAGGTGACCTGCCGGAGAAAGCGCTCGAGGACTATCCACCACCTCTCTCGGTTGTTGGAGTTAGTGTTCTAAAGGGTATCAAGATAAAGGAGATGTTGAAGGAAATAAGGGCTGCTTTAAGGAAGTGCACTGGTTCCAATGAGCCTTCGAGTGTGCCACCGCCGCCTTGA 1533 0.4475 MIMVSPIISPPSSSSSTLHLHSFESTFFFSTPLLPQRNIRFQSRCNKFEKHRWKDAVRCRFISSNAPSTSTSNSNSMTLMKEPHKYFDQVFITVRAGDGGHGAILNAPNTQRSPTKQDQKKDKDKIKKKSSLKRDFDGSLILPMGGHGGDVVIYADEGKDTLLEFHNKGRYNAKRGGNVDAMGVLSSLLRNGITAPTLRIPVPVGTVVKNKRGKTLADLAQPGDEVLVARGGQGGISLLEVPQHQKKRMMTLTTNVMRDESDKVLVHGQPGEEIKLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPTLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRVLVHVVDAAAENPINDYRTVREELRMYNPEYLERPYIVVLNKIDLSEAKNRLSSLSEEIMKIGNNSTASEPKPSPEVPDESSSDEGDLPEKALEDYPPPLSVVGVSVLKGIKIKEMLKEIRAALRKCTGSNEPSSVPPPP 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01237 510 Pfam 50S ribosome-binding GTPase 285 412 IPR006073 GO:0005525
Adu06g01237 510 Coils Coil 415 435 - -
Adu06g01237 510 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 58 503 - -
Adu06g01237 510 Pfam GTP1/OBG 145 281 IPR006169 -
Adu06g01237 510 SUPERFAMILY Obg GTP-binding protein N-terminal domain 145 248 IPR036726 -
Adu06g01237 510 TIGRFAM small_GTP: small GTP-binding protein domain 285 433 IPR005225 GO:0005525
Adu06g01237 510 MobiDBLite consensus disorder prediction 115 131 - -
Adu06g01237 510 PRINTS GTP1/OBG GTP-binding protein family signature 286 306 IPR006073 GO:0005525
Adu06g01237 510 PRINTS GTP1/OBG GTP-binding protein family signature 307 325 IPR006073 GO:0005525
Adu06g01237 510 PRINTS GTP1/OBG GTP-binding protein family signature 342 357 IPR006073 GO:0005525
Adu06g01237 510 PRINTS GTP1/OBG GTP-binding protein family signature 359 377 IPR006073 GO:0005525
Adu06g01237 510 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 284 495 IPR031167 GO:0005525
Adu06g01237 510 CDD Obg 284 422 IPR031167 GO:0005525
Adu06g01237 510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 285 496 IPR027417 -
Adu06g01237 510 Gene3D - 283 502 IPR027417 -
Adu06g01237 510 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 58 503 IPR045086 GO:0003924|GO:0005525
Adu06g01237 510 ProSiteProfiles Obg domain profile. 84 283 IPR006169 -
Adu06g01237 510 MobiDBLite consensus disorder prediction 433 470 - -
Adu06g01237 510 ProSitePatterns GTP1/OBG family signature. 344 357 IPR006074 GO:0005525
Adu06g01237 510 Gene3D GTP1/OBG domain 85 282 IPR036726 -
Adu06g01237 510 MobiDBLite consensus disorder prediction 102 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01237 Adu-Chr6 16670905 16676182 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01237 06 16670905 16676182 Adu06g01237 06 16670905 16676182 ECH