Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01225 ATGCTAAAACGACGTGCGTTTTGGATCGGAGGCCAATTGCCGCGGAACCCTACTTCACTGCCTCCATTGCCCTTCCAACTTGATATGCTCGATCTGATTTTGCTTACTTCTCCAAATCCAAGGACATACATTGGCTCCGGAAAGGTTTCTGAAATTAAGAGTGCAATCCATGCCTTGGACGTTGAAACTGTAATCTTTTATGATGAGCTATCACCTGGGCAATTGCACAACCTGGAAAAGGGAGCAGCAACACATGAAGCATCGTTACAGGCAATTATATATGTTTCATTAGCACAAATGGAATACCAACTACCGCGTCTAACAAAAATGTGGACACATCTTGAGCGTCAATCAGGAGGAAAGGTGAAGGGAATGGGAGAAAAACAAATAGAAGTGGACAAGCGTATTTTGCGAAACCAAATTGGTGCACTTAAGAAAGAGCTAGAATCTGTTAGGAAACACCGACAGCAGTACCGTAACAGGCGTTTCTCAGTACCTGTGCCGGTGGTAGCCTTGGTTGGGTACACAAATGCTGGAAAGAGTACCCTTTTAAATCAATTAACTGGGGCAGATGTTTTTGCCGAGGATAAATTATTTGCAACTTTAGATCCAACTACAAGGAGGGTCCAGCTGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAATTGCCAACTCAACTGGTTGCTGCCTTCATAGCTACGCTGGAGGAGATATCAGAGTCATCACTTCTGGTGCATGTAGTTGATATCAGTCATCCCCTGGCAGAGCAACAAATAAATGCTGTTGACAAAGTTCTGTCAGAACTAGATGTATCATCTATTCCAAGATTGATGGTTTGGAACAAGGTTGATAAGGCTAGTGATCCCCAGAAAATCAGGTTAGAAGCTGAAAATAGAGATGATGTTGTATGCATATCTGCATTAACGGGTGATGGCCTACCAGAATTCTGTAACTCAGTTCAAGAAAAATTGAAGGACTCCATGGTGTGGGTTGAAGCTTTTGGTACCATTTGA 1032 0.4273 MLKRRAFWIGGQLPRNPTSLPPLPFQLDMLDLILLTSPNPRTYIGSGKVSEIKSAIHALDVETVIFYDELSPGQLHNLEKGAATHEASLQAIIYVSLAQMEYQLPRLTKMWTHLERQSGGKVKGMGEKQIEVDKRILRNQIGALKKELESVRKHRQQYRNRRFSVPVPVVALVGYTNAGKSTLLNQLTGADVFAEDKLFATLDPTTRRVQLKNGKEFLLTDTVGFIQKLPTQLVAAFIATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVSSIPRLMVWNKVDKASDPQKIRLEAENRDDVVCISALTGDGLPEFCNSVQEKLKDSMVWVEAFGTI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01225 343 Gene3D - 28 86 IPR042108 -
Adu06g01225 343 Gene3D - 87 153 - -
Adu06g01225 343 PANTHER GTP-BINDING PROTEIN HFLX 35 339 IPR016496 GO:0005525
Adu06g01225 343 TIGRFAM GTP_HflX: GTP-binding protein HflX 82 330 IPR016496 GO:0005525
Adu06g01225 343 ProSiteProfiles HflX-type guanine nucleotide-binding (G) domain profile. 168 334 IPR030394 GO:0005525
Adu06g01225 343 PRINTS GTP1/OBG GTP-binding protein family signature 170 190 IPR006073 GO:0005525
Adu06g01225 343 PRINTS GTP1/OBG GTP-binding protein family signature 237 255 IPR006073 GO:0005525
Adu06g01225 343 Coils Coil 134 161 - -
Adu06g01225 343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 338 IPR027417 -
Adu06g01225 343 TIGRFAM small_GTP: small GTP-binding protein domain 169 321 IPR005225 GO:0005525
Adu06g01225 343 Pfam GTP-binding GTPase Middle Region 82 162 IPR032305 -
Adu06g01225 343 Pfam GTP-binding GTPase N-terminal 36 81 IPR025121 -
Adu06g01225 343 PIRSF GTP-binding_hflX 32 341 IPR016496 GO:0005525
Adu06g01225 343 CDD HflX 127 330 IPR030394 GO:0005525
Adu06g01225 343 Gene3D - 167 335 IPR027417 -
Adu06g01225 343 Hamap GTPase HflX [hflX]. 26 343 IPR016496 GO:0005525
Adu06g01225 343 PANTHER GTP-BINDING PROTEIN 6-RELATED 35 339 - -
Adu06g01225 343 Pfam 50S ribosome-binding GTPase 170 288 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01225 Adu-Chr6 16513778 16516821 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01225 06 16513778 16516821 Adu06g01225 06 16513778 16516821 ECH