Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01218 ATGACAGACGCTGAAGACGCCGTAAGACGTCGTAACGCAGTGGCGGATTATCGAAAGAAGCTCCTCCAGCACAAGGAATTGGAATCCAGAGTTCGATCAGTGAGAGAGAATTTGCGAGCTTCGAAGAAAGAGTTCAATAAAACGGAGGATGACTTGAAGTCTCTTCAAAGTGTTGGCCAGATCATTGGGGAAGTTCTCAGGCCTCTTGACAATGAACGCTTGATTGTTAAAGCAAGCAGCGGACCAAGGTATGTGGTAGGATGCCGGAGTAAAGTTGATAAGGAAAAATTGACTTCCGGTACACGAGTGGTTCTTGATATGACAACACTCACCATAATGCGAGCTCTTCCACGTGAAGTTGATCCAGTTGTTTACAATATGCTGCACGAGGATCCCGGTAATGTGAGTTATTCCGCTGTTGGTGGTCTCTCTGATCAGATAAGGGAATTGAGGGAATCAATTGAATTACCTCTGATGAATCCAGAACTTTTTCTTCGTGTTGGAATTAAACCTCCTAAGGGTGTTCTCCTTTATGGGCCTCCTGGTACGGGTAAAACACTGTTAGCTAGGGCAATTGCCAGTAATATCGATGCTAATTTCTTGAAGGTTGTTTCAAGTGCCATAATTGATAAGTACATTGGAGAAAGTGCAAGGTTGATACGAGAAATGTTTGGGTATGCACGTGATCACCAGCCCTGCATCATTTTTATGGATGAGATCGATGCCATTGGTGGACGCCGTTTTAGTGAGGGAACAAGTGCTGATCGTGAGATTCAGAGAACACTGATGGAGTTGCTTAATCAACTAGATGGATTTGATCAACTTGGGAAGGTTAAAATGATAATGGCAACGAACAGACCTGATGTACTGGACCCTGCTCTTCTACGTCCTGGAAGGTTGGATAGGAAAATAGAAATTCCATTGCCAAATGAACTATCGAGGATGGAAATTCTCAAGATTCATGCTGCTGGGATTGCTAAGCATGGTGAAATAGACTATGAAGCTGTTGTGAAGCTTGCAGAGGGCTTTAATGGGGCCGATCTTCGAAATGTCTGCACGGAAGCTGGAATGTCCGCAATTCGTGCAGAGCGCGACTATGTGATCCATGAAGATTTTATGAAGGCTGTTCGAAAACTGAATGAAGCTAAGAAGCTTGAATCCAGGGATATCCGGGTAGTGCATGATTTGAACAAGAAATATGCATCATGCAATCTGTTTTGCATTGACTTTCTCACAGTTTGTATTTTATAA 1251 0.4341 MTDAEDAVRRRNAVADYRKKLLQHKELESRVRSVRENLRASKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNELSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESRDIRVVHDLNKKYASCNLFCIDFLTVCIL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01218 416 Pfam AAA+ lid domain 331 373 IPR041569 -
Adu06g01218 416 SMART AAA_5 171 310 IPR003593 -
Adu06g01218 416 Pfam ATPase family associated with various cellular activities (AAA) 175 308 IPR003959 GO:0005524|GO:0016887
Adu06g01218 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 396 IPR027417 -
Adu06g01218 416 Gene3D - 312 389 - -
Adu06g01218 416 TIGRFAM 26Sp45: 26S proteasome subunit P45 family 22 379 IPR005937 GO:0005737|GO:0030163|GO:0036402
Adu06g01218 416 PANTHER BNAC02G30020D PROTEIN 2 390 - -
Adu06g01218 416 Gene3D - 23 127 IPR012340 -
Adu06g01218 416 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 2 390 - -
Adu06g01218 416 CDD AAA 141 308 - -
Adu06g01218 416 Pfam Proteasomal ATPase OB C-terminal domain 62 117 IPR032501 -
Adu06g01218 416 ProSitePatterns AAA-protein family signature. 278 296 IPR003960 GO:0005524|GO:0016887
Adu06g01218 416 Coils Coil 24 58 - -
Adu06g01218 416 Gene3D - 128 308 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01218 Adu-Chr6 16439014 16442252 Dispersed/Wgd