Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu06g01211 | ATGGCCTCATCGAGTGGAAACTCGTCTACATCCACCAAATTTTGTGGCTCTGAAGAAGATTTGCAACTTCTGATGGATCAAAAGAAGAGGAAGAGAAAGCAGTCGAACCGCGAATCCGCGAGGAGATCTAGAATGAGGAAGCAAAAGCACTTGGATGACTTAGTTGCTGAAGTTGAGAAGCTTAAAAAGGAGAACAATGAAATCCTTACCGGAGTTAAGATCACAACACAAAAGTTTCTGAATATTGAGGGAGAAAATTCCATCTTAAGGGTCCAAATGAGTGAACTTACCAAAAGGCTTGAATCACTCAATCATATGCTTAGCTTCTTCAACAACAATAACAACACCATCACAAGCACTAGTACAATTTTTGATAGTGAATTCTACCATGATTATAATTTCATGAATCATCATCACATTAACATGTGCCTTAACCAACCCATCATGGCATCTTCAAATCACATGTTTGAGTGGAGTTATCTTCCGTCGGCTCCGCGCTACCTTCCTCTTCTGCGCTCATCCTCAACACTATCTTCTTTCTTCTCGACGTTCATTCACAACGCCACATTCCCCGTCGTCAACACTCATCTTCGTCGCCGCCTTCCTCCTTCTCGTCACCGTTCGTCCACATTAATGTCGCCGTTTATCCACGCCGAAAACTTACCTAAGCATCACTTGAATTCTCTGCTCAGAGGAGAAGGTAGAATAACTATTTCTCAATCAAAACTGGGGCAGCTCCTGAATTTTCTATTGCAATTTTCTGGAGTGGAGAACGAGAATCCCACCTGTCAGAACTCTCACTTGACTAGCAGAAATGTGAGCATGGAATTTAAAGGTCCATTAAGTTCTGAAAGAGGTCATTCATCAGATGGAGGAAGCACCCTGGAGAATTCTGCAACTCCAATATCTCAGAAGTCCCCTTTTGATGACACATTTGTTCCAAATCTGATAGCTACTCCATCTGATCTGTCCATATCAAGCAAATTTTCTATGATGAATTCTGTAGACTCTTCAATTCCGAATCATTCATTTCCAATTCCTCCGGTTTTCTCGTCGCCTGCACTAGATCATCATTCTAATTCTACACCATCAAGACGGGCACATCGATCTCCAGGATCCGGTCGTCACAAGATAATTGGATCCAGCAGCAGCAGGTTCTTGCATTCTCCCTCAATGGATCAACAATCTTGTCCAGCTTGCGCGAGGCCTTTGACCGAACTACCAAATTTTGTTGCCAGAAGTGATGTCTCATGTGTTGCTATCCTTGTGTGTGGCCATGCATATCATGCCGAATGCTTAGAATCTAGAACTGCCGAGGCAAACAAGTTTGATCCAGCATGTCCAGCTTGTATCGTCGGAGATAATCACTCGTCAAAGTCATCCAGAAAAGATATTAGGGTCGAATCAGAGACTTCTAAGGGAAAGCACCAGAAGATATCTCGAAGCCGTGTAGCTGATAGCTACCTTGAATCTGATGTCAATGTTTCCGAACCACAGAAAGACATTGAAAGAATAGGGAAAGTTTCAAAGATGGAGCCGAGCTCAAGTACTAGGAGCACACATGGAAAGCCGTTCTTGAAGAAGCACTTTTCGTTTCGGTCCAAATCAAATCGAACCCTGCCAGAGAATGATACTGCAAGGACAAAGGGCTTTTGGGGAAGACACCGAAAAGAATGA | 1677 | 0.4317 | MASSSGNSSTSTKFCGSEEDLQLLMDQKKRKRKQSNRESARRSRMRKQKHLDDLVAEVEKLKKENNEILTGVKITTQKFLNIEGENSILRVQMSELTKRLESLNHMLSFFNNNNNTITSTSTIFDSEFYHDYNFMNHHHINMCLNQPIMASSNHMFEWSYLPSAPRYLPLLRSSSTLSSFFSTFIHNATFPVVNTHLRRRLPPSRHRSSTLMSPFIHAENLPKHHLNSLLRGEGRITISQSKLGQLLNFLLQFSGVENENPTCQNSHLTSRNVSMEFKGPLSSERGHSSDGGSTLENSATPISQKSPFDDTFVPNLIATPSDLSISSKFSMMNSVDSSIPNHSFPIPPVFSSPALDHHSNSTPSRRAHRSPGSGRHKIIGSSSSRFLHSPSMDQQSCPACARPLTELPNFVARSDVSCVAILVCGHAYHAECLESRTAEANKFDPACPACIVGDNHSSKSSRKDIRVESETSKGKHQKISRSRVADSYLESDVNVSEPQKDIERIGKVSKMEPSSSTRSTHGKPFLKKHFSFRSKSNRTLPENDTARTKGFWGRHRKE | 558 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu06g01211 | 558 | Pfam | bZIP transcription factor | 28 | 67 | IPR004827 | GO:0003700|GO:0006355 | |
| Adu06g01211 | 558 | Coils | Coil | 93 | 113 | - | - | |
| Adu06g01211 | 558 | MobiDBLite | consensus disorder prediction | 354 | 368 | - | - | |
| Adu06g01211 | 558 | Gene3D | - | 26 | 81 | - | - | |
| Adu06g01211 | 558 | MobiDBLite | consensus disorder prediction | 455 | 558 | - | - | |
| Adu06g01211 | 558 | Coils | Coil | 44 | 71 | - | - | |
| Adu06g01211 | 558 | ProSiteProfiles | Zinc finger RING-type profile. | 397 | 450 | IPR001841 | - | |
| Adu06g01211 | 558 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 26 | 89 | IPR004827 | GO:0003700|GO:0006355 | |
| Adu06g01211 | 558 | MobiDBLite | consensus disorder prediction | 457 | 485 | - | - | |
| Adu06g01211 | 558 | MobiDBLite | consensus disorder prediction | 278 | 309 | - | - | |
| Adu06g01211 | 558 | CDD | bZIP_plant_GBF1 | 29 | 79 | IPR045314 | GO:0003700|GO:0006355 | |
| Adu06g01211 | 558 | SMART | brlzneu | 24 | 88 | IPR004827 | GO:0003700|GO:0006355 | |
| Adu06g01211 | 558 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
| Adu06g01211 | 558 | MobiDBLite | consensus disorder prediction | 350 | 385 | - | - | |
| Adu06g01211 | 558 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 379 | 452 | IPR013083 | - | |
| Adu06g01211 | 558 | PANTHER | C3HC4-TYPE RING ZINC FINGER PROTEIN | 372 | 552 | - | - | |
| Adu06g01211 | 558 | PANTHER | C3HC4-TYPE RING ZINC FINGER PROTEIN | 257 | 372 | - | - | |
| Adu06g01211 | 558 | SUPERFAMILY | Leucine zipper domain | 28 | 79 | IPR046347 | GO:0003700|GO:0006355 | |
| Adu06g01211 | 558 | MobiDBLite | consensus disorder prediction | 286 | 309 | - | - | |
| Adu06g01211 | 558 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 31 | 46 | IPR004827 | GO:0003700|GO:0006355 | |
| Adu06g01211 | 558 | SUPERFAMILY | RING/U-box | 393 | 450 | - | - | |
| Adu06g01211 | 558 | Coils | Coil | 18 | 38 | - | - | |
| Adu06g01211 | 558 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Adu06g01211 | 558 | PANTHER | EXPRESSED PROTEIN | 372 | 552 | - | - | |
| Adu06g01211 | 558 | PANTHER | EXPRESSED PROTEIN | 257 | 372 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu06g01211 | Adu-Chr6 | 16347400 | 16355143 | Dispersed/Wgd |
Transcription factors information