Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00179 ATGCAAAAGAGAAGGTTGTTACTTGTTAGTGGATTAGCAACTTATTTGGCAGGGTGGGATTGTTTCGGCTATGACATTATATATGTGAATACTTCTTGGGATCAAATAGCCGAGGTTCTCAACTTTTTTGGTCTTAGTGTAGTAATGTGCATAGGAGTAGCTGCCGGGGCTTACATTCTTACCTTATTTGCTATGAAGTATAGACAACGTGTACTTGGTTTGATACTTGTTTCACCTCTATGCAAAGAACCATCTTGGACTGAGTGGTTGTGCAACAAGGTCATGTCAAATTTACTCTATTTTTGTGGCATGTGCGGGGTGGCAAAGGAAATGTTGCTGAAGCGGTACTATAGCAAGGACATTCGAAGTGGTGCTCAATTCCCAGAGTCAGATATAGTTAAAGCTTGCCGAAGGGTTAGAGAGAGTGAAAGCAATCTGAGGAAAGCATTTGAAGAGGCTGAAAAGAATGCACCATCCATCATCTTCATTGATGAAATTGATTCTATTGCACCCAAGAGGGAGAAGACACATGGTGAAGTTGAAAGGAGGATTGTTTCACAGCTTTTGACTCTTATAGATGGATTGAAATCTCGTGCTCATGTTATCGTTATTGGAGCTACCAATCACCCAAACAGCATTGACCCAGCATTGAGAAGGTTCGGTAGATTTTATAGGAAAATTGATATTGGTGTTCCTGATGAAGTTGGTCGACTTGAAGTTCTTCGTATACACACTAAAAACATGAAGCTCTCTGATGATGACCAGCCACCAGCTTCAAGGAGGTTGAAGAAGCATGGAAGGAATATCTGGGAATTCTTCATGCACAGCAAGGCCAGTGTTGGAGAAGAAAGCAAGGCCACAAGAGCAATTGAACTGTCCAAGACTTGCAGAAGGTACTGGACTGAGGGAGGCTCTCTTCGCAACGTCCCTGTTGGTGGCGGTTCAAGGAAGAATAAGAAGATCATCTCATCATCAGCTTCTTCTTCTTCTTCTTCTCTATCGTCATCTTCTGTACCAAAGGTTCCAGATTTGAACCCACCACAAAACCCTAATAATAAAATGATGCAAGGAGGAGGGCATGATCTCAATTTAGCTTTTCCAGCTATGGACAACTTTCATCATCATGCTTTGTCTGCATATGTTGAGATTCCGAAACTCGAAACCGGAGGAGGAGGAGGAGGAGGTGATGGATCTTCTTCTACTGCTGCTGCTGCTGCTGTTGCTCCAAGTTCTCTATCAGCGATTGAGTTGCTAAGGTCTTCTGGGATGGCTGCTCCTTATGTCCATTCTTCATTGATGCCAAATTCAAATGCTCTTTACCCTTCTGGGTTTCCCATGCAAGAGATTAAGCCCAGTCTTGGGTTTTCTTTGGTTGATGGTGGGCAAGTAGAGAATAATGATAATCATAATAATGGGAGGCTTCTGTTCCCTTTTGGAGTTGACCAAAACAACAAACAACAAGCTGGGAACAATTCAACTGGGTATTGGACTGGTATTATTGGTGAAGGCTCATCATGGTAA 1521 0.426 MQKRRLLLVSGLATYLAGWDCFGYDIIYVNTSWDQIAEVLNFFGLSVVMCIGVAAGAYILTLFAMKYRQRVLGLILVSPLCKEPSWTEWLCNKVMSNLLYFCGMCGVAKEMLLKRYYSKDIRSGAQFPESDIVKACRRVRESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLIDGLKSRAHVIVIGATNHPNSIDPALRRFGRFYRKIDIGVPDEVGRLEVLRIHTKNMKLSDDDQPPASRRLKKHGRNIWEFFMHSKASVGEESKATRAIELSKTCRRYWTEGGSLRNVPVGGGSRKNKKIISSSASSSSSSLSSSSVPKVPDLNPPQNPNNKMMQGGGHDLNLAFPAMDNFHHHALSAYVEIPKLETGGGGGGGDGSSSTAAAAAVAPSSLSAIELLRSSGMAAPYVHSSLMPNSNALYPSGFPMQEIKPSLGFSLVDGGQVENNDNHNNGRLLFPFGVDQNNKQQAGNNSTGYWTGIIGEGSSW 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00179 506 Gene3D - 95 231 IPR027417 -
Adu06g00179 506 SUPERFAMILY alpha/beta-Hydrolases 19 129 IPR029058 -
Adu06g00179 506 ProSitePatterns AAA-protein family signature. 201 219 IPR003960 GO:0005524|GO:0016887
Adu06g00179 506 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG E 140 253 - -
Adu06g00179 506 MobiDBLite consensus disorder prediction 318 356 - -
Adu06g00179 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 254 IPR027417 -
Adu06g00179 506 MobiDBLite consensus disorder prediction 305 360 - -
Adu06g00179 506 SMART AAA_5 95 233 IPR003593 -
Adu06g00179 506 Pfam Ndr family 34 145 IPR004142 -
Adu06g00179 506 Pfam ATPase family associated with various cellular activities (AAA) 100 230 IPR003959 GO:0005524|GO:0016887
Adu06g00179 506 Coils Coil 136 156 - -
Adu06g00179 506 CDD AAA 88 230 - -
Adu06g00179 506 Gene3D - 232 254 - -
Adu06g00179 506 Pfam Dof domain, zinc finger 294 320 IPR003851 GO:0003677|GO:0006355
Adu06g00179 506 PANTHER AAA-FAMILY ATPASE 140 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00179 Adu-Chr6 2068030 2075956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00179 287 506 C2C2-Dof Transcription Factor Family AT3G61850 37.200 6.64e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu06g00179 AAA 3.3e-29 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00179 K13525 - adu:107491015 379.793