Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu05g03198 | ATGGCTTCACTACTCTGTCCCGCACTTGTCTTGTTTGCTGCAAGACTTTCAGGATTTGCAGTTGGACTCCTTGTTCTTTTCTGGGTCCTGACCTTCAAATCCACCTTTCTCCCTTCTTCTTTTTCCCAACAAGACTTCATCTATGCTGTTCTTCATCCTTTGCTGATGGTCATTGGGTTTATTCTCTTAAGTGGAGAAGCAATTTTGGTGCACAGGTGGTTGCCTGGTTCTATGGGATTAAAAAAATCAGTGCATTTAGGGCTTCAAAGTGTGGCACTAGCTTCTGGAATATTTGGAATTTGGACTAAATTTCAGGGGAAGGATGGGATTGTAGCCAATTTCTATAGTCTTCATTCATGGATGGGTTTGATTTGCATTTCCCTCTTTGGAATTCAGTACTTTCGTTATTACTGTCGCTTCTTCTTCTACTACCATTGCTGTCACAACCTTTACCACTGTTCTATCACTACCTCAACCATCGGAGCCACCACATCATATTCTCTTCCTACTTCCGCTACTGCCGCTGCAACTGCCGCTTCTGCTCCTGGCGGAGCTTTTGCTGCTCACATTTCTCCTTCGCAAGAAGAGGATGACGAGGATGTTCAGGTTATAGAATCTCCTCCTCTGGTTGTCGATGTGCCATAG | 645 | 0.4434 | MASLLCPALVLFAARLSGFAVGLLVLFWVLTFKSTFLPSSFSQQDFIYAVLHPLLMVIGFILLSGEAILVHRWLPGSMGLKKSVHLGLQSVALASGIFGIWTKFQGKDGIVANFYSLHSWMGLICISLFGIQYFRYYCRFFFYYHCCHNLYHCSITTSTIGATTSYSLPTSATAAATAASAPGGAFAAHISPSQEEDDEDVQVIESPPLVVDVP | 214 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu05g03198 | 214 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED | 7 | 141 | - | - | |
| Adu05g03198 | 214 | Pfam | Eukaryotic cytochrome b561 | 51 | 142 | IPR006593 | - | |
| Adu05g03198 | 214 | MobiDBLite | consensus disorder prediction | 191 | 214 | - | - | |
| Adu05g03198 | 214 | Gene3D | - | 4 | 181 | - | - | |
| Adu05g03198 | 214 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 214 | IPR006593 | - | |
| Adu05g03198 | 214 | PANTHER | CYTOCHROME B561-RELATED | 7 | 141 | IPR043205 | GO:0016491 | |
| Adu05g03198 | 214 | SMART | 561_7 | 51 | 168 | IPR006593 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu05g03198 | Adu-Chr5 | 103603311 | 103607976 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu05g03198 | 8 | 141 | Chloroplast and Mitochondria Gene Families | AT1G26100 | 58.955 | 1.83e-44 | 146 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Adu05g03198 | 05 | 103603311 | 103607976 | Adu05g03198 | 05 | 103603311 | 103607976 | ECH |