Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03184 ATGGCCACTGTAGCAACAAGTGGAATAGGAGCAGGGTTAACAAAGCTCCAAGCAAACAAAGCAAAGCACAACAAATCCCTCTTTCTGGGCCATGGATTCAGAATCAAACCTTCTTCTCTACCATGCAGCAGTAGAAAGCAGCCTCCTTTTCAAGTGTTTGCATTAGGTGGTGGTGGTGGTGGAAGTGAATGGGTTCTTGATTCCATTCACAACCTCTTTGTGGGTGTTGGGGTTGGTCTCCCTTGCACTGTGATGGAGTGTGGGGACATAATTTATAGGAGCACACTACCAAAGTCAAATGGGTTGACTCTTACAGTTCCTGGTGCGGTTCTTGCTTTGAGTGCTCTCTCTTACCTTTGGGCCACACCTGGGGTTGCACCTGGTTTCTTTGACATGTTTGTTCTTGCTTTTGTTGAGAGATTGTTCAGACCCACTTATAGAAAGGATGACTTTGTTGTGGGCAAGAAGTTAGGAGAGGGATCCTTTGGAGTAGTTTATAGAGCAACACCGTCCAAGCCCTCTTCAAAGGAAGGTGACTTAGTCTTGAAGAAAGCTACTGAATATGGTGCCGTAGAAATTTGGATGAATGAGCGTGTACGGAGAGCTTGTGCAAGCAGCTGCGCAGATTTTCTATACGGGTTTCTTGAGAGCTCTTCAAAGAAAGCTCCTGAATACTGGCTTATATGGCGGTTTGAAGGGGATGCTACCCTAGCTGACTTGCTGCAGAGTAGAGAATTTCCATACAATGTTGAAACATTAATTCTGGGTGAGGTTCAGGACTTGCCGAAGGGAGTTGAAAGAGAAAACAGAATTATTCAAACAATCATGAGGCAACTGTTGTTTGCATTAGACGGTCTTCATTCAACTGGCATTGTGCATAGGGATATTAAGCCACAGAACATTATTTTTTCTGAAGGGTCGCGAACATTCAAAATCATTGATCTTGGAGCTGCTGCAGATCTGCGAGTTGGCATTAACTATATTCCCAAGGAGTTTCTCTTGGATCCAAGATATGCCGCACCAGAGCAATACATCATGAGCACACAAACTCCATCTGCACCCTCGGCTCCTGTAGCAACTGCACTCTCACCGGTTTTATGGCAGTTGAATTTGCCCGACAGATTTGATATCTATAGTGCTGGTCTGATCTTTCTTCAAATGGCATTCCCGGGTTTACGCACCGATAATGGCCTTATACAATTCAACCGTCAATTAAAGAGGTGCGACTATGACTTGGTTACTTGGAGAAAAAGCGTAGAGCCTCGATGTGGCCCTGAACTTAGGAGGGGCTTTGATTTGTTGGATTTAGATGGTGGAATAGGATGGGAACTTCTGACATCAATGGTTAGATACAAAGCAAGGCAAAGGCTGAGTGCAAAAGCCGCATTGACTCATCCTTTCTTCGATAGAGAAGGTTTGTTGGCACTGTCTTTCATGCAAAATCTGAGGCTGCAGCTCTTACGAGCGACTCAGCAGGATTACGGAGAAGCTGCCAAGTGGGTCACTGAACTAATGGCAAAATCAGGAACTGAGAAGGATGGTGGATTCACTGAAGCTCAGCTCCTTGAACTAAAAGAAATTGAACCCAAGAAGAAGAAGAAGGCTAATGCACAGAGAAACGCTCTAGCTTCTGCACTTAAACTTCAGAGGAAAATCATTAAAACCTTAAATGAGAGTATGGATGAGCTCAGCAGACGAAGGAAAAGCATTTGGTGGAGCAGGTGGATCCCAAGAGAGGAATGA 1743 0.4475 MATVATSGIGAGLTKLQANKAKHNKSLFLGHGFRIKPSSLPCSSRKQPPFQVFALGGGGGGSEWVLDSIHNLFVGVGVGLPCTVMECGDIIYRSTLPKSNGLTLTVPGAVLALSALSYLWATPGVAPGFFDMFVLAFVERLFRPTYRKDDFVVGKKLGEGSFGVVYRATPSKPSSKEGDLVLKKATEYGAVEIWMNERVRRACASSCADFLYGFLESSSKKAPEYWLIWRFEGDATLADLLQSREFPYNVETLILGEVQDLPKGVERENRIIQTIMRQLLFALDGLHSTGIVHRDIKPQNIIFSEGSRTFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPGLRTDNGLIQFNRQLKRCDYDLVTWRKSVEPRCGPELRRGFDLLDLDGGIGWELLTSMVRYKARQRLSAKAALTHPFFDREGLLALSFMQNLRLQLLRATQQDYGEAAKWVTELMAKSGTEKDGGFTEAQLLELKEIEPKKKKKANAQRNALASALKLQRKIIKTLNESMDELSRRRKSIWWSRWIPREE 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03184 580 Gene3D Transferase(Phosphotransferase) domain 1 259 472 - -
Adu05g03184 580 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 13 580 IPR044803 GO:0004674|GO:0009579
Adu05g03184 580 Pfam Protein kinase domain 152 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g03184 580 Coils Coil 546 566 - -
Adu05g03184 580 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 13 580 - -
Adu05g03184 580 ProSitePatterns Protein kinases ATP-binding region signature. 157 183 IPR017441 GO:0005524
Adu05g03184 580 Gene3D Phosphorylase Kinase; domain 1 137 230 - -
Adu05g03184 580 ProSiteProfiles Protein kinase domain profile. 151 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g03184 580 CDD STKc_SNT7_plant 155 468 - -
Adu05g03184 580 SMART serkin_6 151 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g03184 580 SUPERFAMILY Protein kinase-like (PK-like) 145 471 IPR011009 -
Adu05g03184 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03184 Adu-Chr5 103326951 103332748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03184 268 469 Core Cell Cycle Gene Families AT2G38620 31.163 4.27e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Adu05g03184 Pkinase 1e-18 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03184 05 103326951 103332748 Adu05g03184 05 103326951 103332748 ECH