Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03174 ATGCAAACTCATCATCACTCTTTCTCATCCTACATATCCTCTTGTGGGAGTAGTAGTACTACTAGTCCCTTCTTGGACAATCCCGAAGATGCCGATGTTGTGCTTCTTGATGACGAAGAAGCCTCCATTTCCCTTTCTCTTGGGCCTCCCGGCCAACATCACAACCCCAAGATCTCTACAACTTCACCACTACTGCACCATAACCATTACAATCCCAACCCTAACTGTGATGATGACCAGAGTGGTGTAACCGTTGCTCTACACATTGGCCTTCCTTCCACGACAACAACAACTGCACCCAACACCACCACCACCATCAGCACCACAACAAGTAAAACTGATACCCTTCAGGGTCAGTACTGGATCCCTTCCCCTGCACAAATCCTCATTGGTCCCACTCAGTTCTCTTGCACTGTCTGCAACAAAATGTTCAATCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGGTCACAATATAGGAAAGGACCAGAATCATTAAGAGGAGCAAAGCCAGCATCTTCAATGCTGAGGCTACCATGCTATTGTTGCGCGGAAGGTTGCAAGAACAACATAGAGCACCCAAGATCAAGGCCTCTCAAGGATTTCAGGACACTGCAGACTCACTACAAGAGAAAGCATGGCGCCAAGCCCTTCGGCTGCCGCAAGTGCGGTAAGCCCTTCGCCGTCCGAGGAGATTGGAGGACGCACGAGAAGAATTGCGGCAAACTTTGGTTTTGCATATGTGGCTCCGATTTCAAGCACAAGAGGTCCCTCAAGGACCATGTCCGCGCCTTCGGCGACGGCCATGCTCCTCATACTGTGGAAAGCTGTGACCAGTTCGTCGATGAAGAAGAAGATGATTATGAACTTGATGATGACGACGACCTAGACTTAGAAGATAATAACAACAATAATAGTAACGGCAATCAAGGTGTTTTTAGTTTCAATTAA 957 0.4775 MQTHHHSFSSYISSCGSSSTTSPFLDNPEDADVVLLDDEEASISLSLGPPGQHHNPKISTTSPLLHHNHYNPNPNCDDDQSGVTVALHIGLPSTTTTTAPNTTTTISTTTSKTDTLQGQYWIPSPAQILIGPTQFSCTVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCDQFVDEEEDDYELDDDDDLDLEDNNNNNSNGNQGVFSFN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03174 318 PANTHER ZINC FINGER PROTEIN WIP6 2 307 - -
Adu05g03174 318 MobiDBLite consensus disorder prediction 303 318 - -
Adu05g03174 318 MobiDBLite consensus disorder prediction 1 26 - -
Adu05g03174 318 ProSitePatterns Zinc finger C2H2 type domain signature. 137 157 IPR013087 -
Adu05g03174 318 ProSiteProfiles Zinc finger C2H2 type domain profile. 135 162 IPR013087 -
Adu05g03174 318 SUPERFAMILY beta-beta-alpha zinc fingers 203 240 IPR036236 -
Adu05g03174 318 MobiDBLite consensus disorder prediction 292 318 - -
Adu05g03174 318 PANTHER ZINC FINGER PROTEIN WIP2 2 307 IPR043584 GO:0003700|GO:0010468
Adu05g03174 318 Gene3D Classic Zinc Finger 177 265 - -
Adu05g03174 318 SUPERFAMILY beta-beta-alpha zinc fingers 128 157 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03174 Adu-Chr5 103143031 103144555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03174 36 276 C2H2 Transcription Factor Family AT1G13290 71.545 1.74e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu05g03174 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03174 05 103143031 103144555 Adu05g03174 05 103143031 103144555 ECH