Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03167 ATGATGAAGACAATTTCCTCTACAGAGGAACTGATAGAGAACTTTCAAAGCTCTTTATCTTCTACCATCACTCAACTAGCCTCTATATCGCAGTTCCAAACTGAAAGTGTGTCTCACAAATTTTATAAAAAGCTTTTAGTTCTATCTTGCCTTCATCTGAAAGAAAGAAAGAAAAGAGGAGTGCTGGCTGGCTTGCCCCTCATATTTATATATATTTTCTGTCTCACTCTGCGTGTCGGTACCATGAGACCAGAAGGAAATCCATTAGACCTTAACAATTTGCCTGATGACTACAATAGAGATCATGGCAAACAACTCCTCCAAGACACCTTCTCTCCCGGTTGCAGGAAAAAGAAAAGCGGCGGCGGTAAGGATGGAAAAGAGGAGTGTGGGAAGGTGTATGAGTGTAGATTTTGTTCCCTCAAGTTCTGCAAGTCCCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGGCTACTCTCTACTCTATCTCTTTTTCCTTTATATTATTATATACGGGGGACACAGATTGATAGATT 541 0.4214 MMKTISSTEELIENFQSSLSSTITQLASISQFQTESVSHKFYKKLLVLSCLHLKERKKRGVLAGLPLIFIYIFCLTLRVGTMRPEGNPLDLNNLPDDYNRDHGKQLLQDTFSPGCRKKKSGGGKDGKEECGKVYECRFCSLKFCKSQALGGHMNRHRQGYSLLYLFFLYIIIYGGHRLID 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03167 180 ProSitePatterns Zinc finger C2H2 type domain signature. 136 156 IPR013087 -
Adu05g03167 180 PANTHER ZINC FINGER PROTEIN JAGGED 82 158 IPR045320 GO:0003700
Adu05g03167 180 PANTHER ZINC FINGER PROTEIN JAGGED 82 158 IPR031113 GO:0007275
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03167 85 158 C2H2 Transcription Factor Family AT1G13400 56.757 6.03e-17 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu05g03167 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03167 05 102990503 102992690 Adu05g03167 05 102990503 102992690 ECH