Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03161 ATGGATGCTCGCGCTTTCTCTTCTCATTCCGACGCTTCCGTTGCCGCTGCAACCACAGATCAGAATGTGGAGCAATGCAGAAGTGGCAACAACAGTGAAGCCACGATTATGGAGAAACCAAGGCGATGGCATGATGTTTTCTGGTCTGGAATGTTTGTAATCCACTTGATTGGTTTCGGTTTTGTTCTTGTTGTTCTTGGCCTCAACAGATTCAAGAAGAAGAACAGGCTTGACATTGATAAGTACACATACCGCTTCATGGAGAATCAAGCCGGATTGACAGAGGATTACTGGCCAGTCTATGCGGTTGCCGGTTTAGTTGGGACTGCTCTTGGATGTTGTTGGCTGTCGCTGTTGGGTTCATGTGCTACCCTTATGATGAAGGTGTCTGTTCATATCCTCACCACATATCTTGCTGTGATCAGTGTTCTCTCTTTTTGGGCTGAGCAGGTCTTCTGGGGTGTCGCTTTTGCTATTGGAGCATGCCTTCAGCTTTTGTATGTGATATCTGTTATAGACAGACTTCCATTTACTATGTTAGTTTTGCAAAAGGCTGTTAAGATGGTATGGAATCTTCCTGAGGTTATGAAAGTTGCACATGCATTTGTGCTGCTGCTTCTTTCGTGGATGGTGTTGTGGTCATTTGGAGTAGCTGGTGTTGTGGCTTCAAGTATGGGTGACGGTGGACGCTGGTGGCTTCTTGTGGTCCTCTCTGTAAGCTTATTTTGGACTGGTGCTGTACTGTGTAATACTCTGCATGTCGTTGTGTCTGGAATTGTGTTCCTCGCGAACGTCCATTATAGCAAAGAGAGTTCAGCATTTCCCACTAACTCCTTAATGAAATCATTGCAATATGCTTTAACAACATCGTTTGGCAGCATTTGTTATGGCTCATTATTTACAGCTGTTATTAGGACAATGCGGTGGCAGATTCGAGGCGTCCGAGCAAAGATAGGCAATAATGAATGTTTACTTTGTTGTGTTGATTTCCTTTTCCACATGGTGGAAACTCTTGTCCGATTCTTTAACAAGTATGCATATGTTCAGATTGGTGTGTATGGAAAAAGCTTTAACCACTCTGCCAGAGATGCATGGGAGTTATTCCAATCAACTGGAGTTGAAGCACTTGTGGCCTATGATTGTTCAGGTGCTATAATGTTAATGGGAACCATTTTTGGAGGTCTGATAACTGGAACTTGCGCAGGTGTCTGGGCATGGATTAAGTGGAGTAATAGAGCTTTTATGATCGGATCCATGTCTATGCTCATGGGAATGGTGTTGGTTGGAGTGGCTATGGTTGTGGTGGAAAGTGCTGTTACTTCAATATATGTATGCTATGCTGAAGACCCCTTATCGATTCATAGATGGGACCCTGAATTCTTCAACCAGATCTCTGAGACACTAAACCAGCGGCTTCAACATAGAAGTAAACGTCAACAGCCAGCTCCTCCACCGTCGTCGAACTCTTCTCGTCAGCTAGACGGTTTTGTCGTGGCGAGTAGTGACGGGCAGAGGGTCCGCTCGAAGCTCTTGGCCATCGATCTTCTTGTCCACGTCGCCACCTCTGTACTTGCAGATAGGAGCTCGCGGTCGTCTTCTACTCTTCTCTACATCGTCGTTGTGGTCGTGGACTTGTAG 1638 0.4548 MDARAFSSHSDASVAAATTDQNVEQCRSGNNSEATIMEKPRRWHDVFWSGMFVIHLIGFGFVLVVLGLNRFKKKNRLDIDKYTYRFMENQAGLTEDYWPVYAVAGLVGTALGCCWLSLLGSCATLMMKVSVHILTTYLAVISVLSFWAEQVFWGVAFAIGACLQLLYVISVIDRLPFTMLVLQKAVKMVWNLPEVMKVAHAFVLLLLSWMVLWSFGVAGVVASSMGDGGRWWLLVVLSVSLFWTGAVLCNTLHVVVSGIVFLANVHYSKESSAFPTNSLMKSLQYALTTSFGSICYGSLFTAVIRTMRWQIRGVRAKIGNNECLLCCVDFLFHMVETLVRFFNKYAYVQIGVYGKSFNHSARDAWELFQSTGVEALVAYDCSGAIMLMGTIFGGLITGTCAGVWAWIKWSNRAFMIGSMSMLMGMVLVGVAMVVVESAVTSIYVCYAEDPLSIHRWDPEFFNQISETLNQRLQHRSKRQQPAPPPSSNSSRQLDGFVVASSDGQRVRSKLLAIDLLVHVATSVLADRSSRSSSTLLYIVVVVVDL 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03161 545 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 21 480 IPR007603 GO:0022857|GO:0055085
Adu05g03161 545 Pfam Plasma-membrane choline transporter 156 450 IPR007603 GO:0022857|GO:0055085
Adu05g03161 545 MobiDBLite consensus disorder prediction 1 31 - -
Adu05g03161 545 MobiDBLite consensus disorder prediction 472 493 - -
Adu05g03161 545 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 21 480 - -
Adu05g03161 545 MobiDBLite consensus disorder prediction 11 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03161 Adu-Chr5 102899720 102905638 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03161 05 102899720 102905638 Adu05g03161 05 102899720 102905638 ECH