Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03160 ATGGCACCTCTCTTACTCCTTTTCTTTATCTTCTTCGCCTCTTCTTCTCCACTAACACACTCTCGAACCAGGCCCCTCAAAACGACAACGCTCGACGTCGCTTCATCCCTTCAGAAAACCACCCGTAATGGCCCCACTTCATACTCCCTAAAAACACAACCTTCAGAATCTACACTCTCCCTTCAACTCCTTTCTCGCGCTTCAATTCAAAAGCACCACTCATACACGAACAACTACAAGTTATTCACACTCTCATTACTCGAGCGCGACTCAGCCCGAGTCAAGGTCATAGAAACTCGCCTAGATCTCGCTCTGAAACGAGTTTCGCGCACGGATCTTCACCCGGCCGAGTCGATGACCGAGTTAGACCCGGAGGAAATGCAAGGACCGTTGATATCCGGAACGAGTCAAGGAAGCGGCGAGTACTTCGTTCGAGTCGGAATCGGTAACCCGCCAAGTCAAGCTTACCTGGTCATCGACACGGGCAGCGACGTAAGCTGGATCCAGTGCGCACCTTGCGCCGACTGCTATGACCAAGCTGATCCAATATTCCAGCCGGATTCATCGGCTTCCTATGCACCAATCCCCTGCGCCGCGGCGCAGTGCAAGTCCCTAGACCTCTCCGAGTGCCGTAACGGAACCTGCCTCTACGAGGTTTCTTATGGCGACGGTTCTTTCACAGTCGGCGACTTCGCGACGGAGACCATTACGCTCGGCTCCGTTTCAGTTCCCAATGTCGCCATCGGCTGCGGCCACAACAACGAAGGCTTGTTCGTCGGAGCTGCTGGCTTGCTCGGCCTCGGAGGCGGCCCGTTGTCTTTCCCGGCTCAGCTCAACGCCACTTCATTTTCCTACTGTCTCGTGGACCGCGATTCTGACCATGCTTCAACTCTCGAGTTTCACTCGGCATTATCTCATTACGCCGTCACGGCGCCTTTACGGCGGAACAAGGAGATGAACACATTCTATTATGTTGGACTGACCGGAATTGGTGTGGGCGGTGAGGTACTTCCTATTCCGGAGGCGAGTTTCGAGGTGGATAGCACCGGCGCCGGAGGTGTTATTGTGGATTCTGGCACGGCTGTGACGAGGTTAAAAGAGGAGGTGTACGACGTTCTGAGGGATGCGTTTCTGAGCGGGACAAAAGGGTTGCAGAGGGCGAACGGCGTGGCGTTGTTTGATACTTGCTACGACTTGTCGTCTAAGTCGAGCGTTGAGGTTCCGACGGTGTCGTTTCATTTTCCTGGGGGGAGGGAGTTACCGTTACCGGCAAAGAATTACCTGATACCGGTTGACTCGGTGGGGACGTTCTGCTTTGCCTTCGCCCCCACTACGTCTTCCTTGTCGATAATTGGGAATGTTCAGCAGCAAGGGACACGTGTCGGTTTCGATGTCGCTAACTGGGTCGTTGGATTCTCTGTCGATAGCTGCTAG 1434 0.5418 MAPLLLLFFIFFASSSPLTHSRTRPLKTTTLDVASSLQKTTRNGPTSYSLKTQPSESTLSLQLLSRASIQKHHSYTNNYKLFTLSLLERDSARVKVIETRLDLALKRVSRTDLHPAESMTELDPEEMQGPLISGTSQGSGEYFVRVGIGNPPSQAYLVIDTGSDVSWIQCAPCADCYDQADPIFQPDSSASYAPIPCAAAQCKSLDLSECRNGTCLYEVSYGDGSFTVGDFATETITLGSVSVPNVAIGCGHNNEGLFVGAAGLLGLGGGPLSFPAQLNATSFSYCLVDRDSDHASTLEFHSALSHYAVTAPLRRNKEMNTFYYVGLTGIGVGGEVLPIPEASFEVDSTGAGGVIVDSGTAVTRLKEEVYDVLRDAFLSGTKGLQRANGVALFDTCYDLSSKSSVEVPTVSFHFPGGRELPLPAKNYLIPVDSVGTFCFAFAPTTSSLSIIGNVQQQGTRVGFDVANWVVGFSVDSC 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03160 477 Gene3D Acid Proteases 300 477 IPR021109 -
Adu05g03160 477 PANTHER ASPARTYL PROTEASES 31 477 IPR001461 GO:0004190|GO:0006508
Adu05g03160 477 Gene3D Acid Proteases 117 299 IPR021109 -
Adu05g03160 477 Pfam Xylanase inhibitor C-terminal 323 473 IPR032799 -
Adu05g03160 477 ProSiteProfiles Peptidase family A1 domain profile. 142 473 IPR033121 -
Adu05g03160 477 SUPERFAMILY Acid proteases 136 477 IPR021109 -
Adu05g03160 477 Pfam Xylanase inhibitor N-terminal 142 300 IPR032861 -
Adu05g03160 477 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 157 168 IPR001969 GO:0004190|GO:0006508
Adu05g03160 477 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 31 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03160 Adu-Chr5 102879024 102880769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03160 132 477 Miscellaneous Gene Families AT1G77480 27.062 3.64e-23 99.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03160 05 102879024 102880769 Adu05g03160 05 102879024 102880769 ECH