Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02722 ATGGAGAGAGAAGAACACCAAAAGGCGTCTCTCCATTCTCCTTTGATTCAAGATTGTGCAGAGCAGAACAAAGCAAAATCAATAGAAAAGAGTGAGGTAGTTGAAGAAGTGAAGAAGCAGCTATGGCTATCAGGGCCTTTGGTATCTGTGAGCTTGCTCAATTATTGCCTGCAAGTCATATCTGTCATGTTTGTTGGTCATCTCGGCGAGTTGGCGCTTTCCGGCGCTTCAATGGCCACTTCTTTTGCCTCTGTTACAGGTTTTAGCTTATTGGTGGGAATGGCTAGTGCCTTGGACACCTTATGTGGGCAATCATATGGAGCAAAACAGCACAGAATGTTAGGCATACACATGCAGAGAGCAATGCTGATTCTCATGATTGTCAGCGTTCCGCTCGCGGTTATTTGGATCAACACAAGATCAATTCTGATGTTTCTTGGCCAAGATCCTGAGATTTCTACAGAAGCAGGAAGCTATGCTCAGTTAATGGTTCCAAGCCTTTTTGCTTATGGCCTTCTTCAGTGCCTAAACAGATTCTTGCAAACACAGAACATAGTGTTTCCAATGGTGTTCTGCTCTGGAATCACTACTTTGCTACATGTCCTTATTTGTTGGATTATGGTGTTCAAATCTGGATTGGGGAGTAGAGGAGCTGCCATAGCAAATTCTATATCTTATTGGATCAATGTTTTATTGCTCTCACTTTATGTCAAGCTTTCTCCTTCTTGTGCAAGGACTTGGTCAGGGTTTTCTAAAGAGGCATTTCAAAATATTCCCTCATTTCTTAGGCTTGCAATTCCTTCAGCTGTTATGGTTTGCTTGGAAATGTGGTCATTTGAAATGATGGTTCTCCTTTCCGGTCTTCTTCCAAATCCACAATTGGAGACATCAGTTCTTTCTATTTGCTTGAATACAGCAGCAGCAGTTTGGATGATACCCTTTGGACTCAGTGGAGCTGTAAGCACTCGCGTCTCGAATGAACTTGGAGCTGGTAATCCCAAGACTGCACGCTTAGCAGTGTGTGTTGTGTTAGTAATGGCCATTATTGAGGGACTCATAGTTGGATTAGTGCTAATATTAATTCGCCATGTTTGGGGCTATGCGTATAGTAACGAAGGCGAAGTGGTCGATTATGTTGCAGTTATGCTGCCAATTCTTGCAACATCCAACTTTCTTGATGGACTCCAATGTGTTCTTTCAGGCACTGCTAGAGGATGTGGTTGGCAGAAAATTGGCGCATATGTGAATCTGGGATCATACTACTTAGTTGGGATTCCATCAGCTATTCTCTTGGCTTTTACATTTCATATTGGCGGCAAGGGGTTATGGCTAGGGATCATATGTGCACTAATTGTTCAAGTACTTTCTCTACTGACCATTACTATAAGAACTGATTGGGACCAAGAGGCAAAGAAGGCTACAGATAGAGTCTTTGATTCAATCACACCAGACAGTATAGTCTCATGA 1467 0.426 MEREEHQKASLHSPLIQDCAEQNKAKSIEKSEVVEEVKKQLWLSGPLVSVSLLNYCLQVISVMFVGHLGELALSGASMATSFASVTGFSLLVGMASALDTLCGQSYGAKQHRMLGIHMQRAMLILMIVSVPLAVIWINTRSILMFLGQDPEISTEAGSYAQLMVPSLFAYGLLQCLNRFLQTQNIVFPMVFCSGITTLLHVLICWIMVFKSGLGSRGAAIANSISYWINVLLLSLYVKLSPSCARTWSGFSKEAFQNIPSFLRLAIPSAVMVCLEMWSFEMMVLLSGLLPNPQLETSVLSICLNTAAAVWMIPFGLSGAVSTRVSNELGAGNPKTARLAVCVVLVMAIIEGLIVGLVLILIRHVWGYAYSNEGEVVDYVAVMLPILATSNFLDGLQCVLSGTARGCGWQKIGAYVNLGSYYLVGIPSAILLAFTFHIGGKGLWLGIICALIVQVLSLLTITIRTDWDQEAKKATDRVFDSITPDSIVS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02722 488 CDD MATE_eukaryotic 36 472 IPR045069 GO:0042910|GO:1990961
Adu05g02722 488 TIGRFAM matE: MATE efflux family protein 46 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu05g02722 488 PANTHER PROTEIN DETOXIFICATION 19 476 - -
Adu05g02722 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 476 - -
Adu05g02722 488 Pfam MatE 267 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu05g02722 488 Pfam MatE 46 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02722 Adu-Chr5 94696516 94700945 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02682 09 114306527 114309484 Adu05g02722 05 94696516 94700945 ECH
Adu09g02683 09 114319438 114322265 Adu05g02722 05 94696516 94700945 ECH
Adu05g02722 05 94696516 94700945 Adu05g02722 05 94696516 94700945 ECH
Adu05g02722 05 94696516 94700945 Adu03g04036 03 129463426 129468454 PCT