Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01980 ATGAATTTCTGTTCTCACTACATGGATGATGAATATGAGAAACTGTTCCGAAGACTCAACCCCCCCAGAGTTGTCATTGATAATGAATCAGGCAAGAGCGCCACTGTTATAAGGGTTGATAGTGCAAACAAGCATGGAATTCTTCTCGAAGTTGTACAAATCCTCACTGATCTGAACCTCATCATAACCAAAGCTTACATTTCTTCTGATGGTGGATGGTTCATGGATGTTTTTAATGTCACTGACCAAGATGGAAACAAAGTTACAGATGAAGCTATTTTGGAATACATTGAAAAGTCTCTTGGTCCCGAATCATGTGTTTCATCTCCCATGAGGTCCGTTGGGGTGAAGCAAACAGTGGACCACACCACAATAGAGCTTATGGGGAGTGATAGGCCGGGGCTGCTCTCCGAAGTGAGCGCCGTCCTCACCAACTTAAAGTGCAACATTGTGAGTACAGAGGTGTGGACTCACAACACCCGTGCGGCCGCTGTGATGCATGTAACCGATGATGAGACAGGCTCTTCAATCACCGATCTGAAGAAGCTGTCTCTGATCAAGGAGCTTCTTTGCAATGTGCTTGGTGGTGGAAACAGAAAAAGGGTTGCCAAGACTGTTGTTACTGATGAAGTCACAACGCATACCGACAGGAGGCTTCACCAGATGATGTTTGATGACAGGGATTACGAGCGAGTTAGTGACGACGAATTTGACGAGAAGCAGAGGCCGAATGTGAATGTTGTGAATTGGTCTGATAAAGATTATTCGGTTGTTACCATTCAGTGTAAGGATAGGCCGAAGCTTCTATTCGACACAGTTTGCACTTTGACAGATATGCAGTACGTGGTTTTTCATGCGAACGTCAATGCCGAGGGGCCAGAAGCATATCAGGAATATTACATAAGGCATATAGATGGGTCACCTGTAAAATCAGATGCAGAAAGACAAAGGGTGATACAATGTCTTGAAGCTGCAATTGAAAGAAGAGTATCTGAGGGTTTGAAGTTAGAACTCTGCACAACTGATAGAATCGGACTTCTTTCTGATGTCACGCGTATCTTTCGAGAGAACAGCCTCACTGTTACAAGGGCAGAAGTGACCACGAAAGGAGGCAAAGCTGTTAACACGTTCTATGTGCGTGGCGCCTCCGGTTGCACAGTTGATTCTAAGACCATAGAATCAATTCGGCAAGCAATAGGGAACACTATCCTTAAAGTTAAGGGCACCCCTGAAGAATCTGTTCCTCAGGATTCCCCTACAAGATCTCTCTTTGGTGGTCTTTTCAAGTCCAGATCCTTTGTTAATTTCGGATTGGTCAAGTCTTATTCCTGA 1332 0.4459 MNFCSHYMDDEYEKLFRRLNPPRVVIDNESGKSATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEAILEYIEKSLGPESCVSSPMRSVGVKQTVDHTTIELMGSDRPGLLSEVSAVLTNLKCNIVSTEVWTHNTRAAAVMHVTDDETGSSITDLKKLSLIKELLCNVLGGGNRKRVAKTVVTDEVTTHTDRRLHQMMFDDRDYERVSDDEFDEKQRPNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANVNAEGPEAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRIGLLSDVTRIFRENSLTVTRAEVTTKGGKAVNTFYVRGASGCTVDSKTIESIRQAIGNTILKVKGTPEESVPQDSPTRSLFGGLFKSRSFVNFGLVKSYS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01980 443 SUPERFAMILY ACT-like 121 182 IPR045865 -
Adu05g01980 443 ProSiteProfiles ACT domain profile. 124 210 IPR002912 -
Adu05g01980 443 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 441 IPR040217 -
Adu05g01980 443 Pfam ACT domain 35 94 IPR002912 -
Adu05g01980 443 Pfam ACT domain 124 173 IPR002912 -
Adu05g01980 443 ProSiteProfiles ACT domain profile. 36 115 IPR002912 -
Adu05g01980 443 ProSiteProfiles ACT domain profile. 335 414 IPR002912 -
Adu05g01980 443 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 4 441 - -
Adu05g01980 443 CDD ACT_ACR_1 34 104 - -
Adu05g01980 443 SUPERFAMILY ACT-like 331 401 IPR045865 -
Adu05g01980 443 Gene3D - 120 192 - -
Adu05g01980 443 SUPERFAMILY ACT-like 33 99 IPR045865 -
Adu05g01980 443 CDD ACT_ACR_3 255 329 - -
Adu05g01980 443 Gene3D - 334 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01980 Adu-Chr5 74602361 74605928 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01980 05 74602361 74605928 Adu05g01980 05 74602361 74605928 ECH