Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00866 ATGGCAGGTTTGTTCTCACTAGGCGGTGGTAGTAGTAGTAGTAGTGGTAGAGGAGGGAGAGGGAACACAAACCAACAACAACAACAACACGACCAACACCAACAACACGCGGAAATTCCTCCCTCCGACACCTTTTACTGGTACAAGAATGAAGACGTTTCCTCGTACCGAGGTGGCTTGGAGCTGTGGAACCATCATCATCATCATCACCAACCAGAACACGACCTCATACCTCAAGCAAGGCCTCTCTTCCACCAAGATCTTTACAGCTCCGCGGCTGCTCTAGGAGTGGGTCCAACCACCGTGTCCGACGATCAGTCACCCTCGAGATCGGCCTTCCTGGTGACGGCGTCGGCCGTGGGGAGCGGAGCAGCAAGCGGAGCAGGAAGTGGAGCAGGTGGGATTAGCTGCCAGGACTGCGGGAACCAGGCGAAGAAGGATTGCCCTCACATGCGGTGCAGGACATGCTGCAAGAGCCGTGGCTTCGATTGCCAAACCCATGTCAAGAGCACTTGGGTTCCCGCTTCCAAGCGCCGCGAGAGGCAGCAGCAACTCGCCTCTATCCAACAACAACAGCTTCTTGCTGCTGATGTTCCCAAGCGCCAAAGAGATCATGCCTCTAGTACTCGTTTACCCACAAACCCTTCTTCTTCAGCCTCGGCTTCAGGGATGGAGAATTTTCCTGCAGTAGTGAGCTCTCCAGCTGAATTCAGATGCGTACGTGTGAGTGGAATCGACGACACAGAAGACGAGTATGCATATCAAACGGCAGTCAACATTGGAGGACACGTCTTCAAAGGGATCCTCTATGACCAGGGTCCAGATCACGCCACTACCACCACCACCAACAGCAGCAGCTACGTCGCCGGAGACACCTCCTCCACCGGTGCTGCTGCTCATCACCCTAATCTCAACCTCATTGCTCCCAACACCAACACCACAACTTCAGCCCTCGTCTCCGCTGCACACACAACGCAGCAGCTCGTAGATCCTTCATCCATGTATCCACCTCCTCTCAGCACCTTCATGGCTGGTAGTAGCGGTACGCAATTCTTCCCTCATCCAAGATCTTGA 1074 0.5447 MAGLFSLGGGSSSSSGRGGRGNTNQQQQQHDQHQQHAEIPPSDTFYWYKNEDVSSYRGGLELWNHHHHHHQPEHDLIPQARPLFHQDLYSSAAALGVGPTTVSDDQSPSRSAFLVTASAVGSGAASGAGSGAGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLASIQQQQLLAADVPKRQRDHASSTRLPTNPSSSASASGMENFPAVVSSPAEFRCVRVSGIDDTEDEYAYQTAVNIGGHVFKGILYDQGPDHATTTTTNSSSYVAGDTSSTGAAAHHPNLNLIAPNTNTTTSALVSAAHTTQQLVDPSSMYPPPLSTFMAGSSGTQFFPHPRS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00866 357 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 355 IPR007818 GO:0003700|GO:0006355
Adu05g00866 357 PANTHER PROTEIN SHORT INTERNODES 1 355 - -
Adu05g00866 357 MobiDBLite consensus disorder prediction 175 225 - -
Adu05g00866 357 MobiDBLite consensus disorder prediction 1 42 - -
Adu05g00866 357 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 227 274 IPR006511 -
Adu05g00866 357 Pfam Domain of unknown function (DUF702) 134 275 - -
Adu05g00866 357 MobiDBLite consensus disorder prediction 7 39 - -
Adu05g00866 357 MobiDBLite consensus disorder prediction 175 196 - -
Adu05g00866 357 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 136 178 IPR006510 -
Adu05g00866 357 MobiDBLite consensus disorder prediction 208 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00866 Adu-Chr5 10761510 10764001 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Adu05g00866 DUF702 2e-66 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00115 08 1565795 1568290 Adu05g00866 05 10761510 10764001 ECH
Adu03g00524 03 4885964 4887130 Adu05g00866 05 10761510 10764001 ECH
Adu05g00866 05 10761510 10764001 Adu05g00866 05 10761510 10764001 ECH