Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00716 ATGCCCTCCTCCGACTCCGGCGAAAGCCGTCGATCAGCCAAGCCTCACAACACTTCCCTAGCCCCACCGCCGGCCGAGCAAGAGCACCTGCCGTGCCCTCGCTGCGACTCTACTAATACCAAGTTCTGCTACTACAACAACTACAACCTCTCCCAGCCACGCCACTTCTGCAAGAACTGCCGCCGCTACTGGACCAAAGGCGGCGTCCTCCGCAACGTCCCTGTCGGCGCTCCGCGGTTCGGTGGAGTAGTCGTGGATGGTGAAGCAAAGGGTAATAACGTGAGCTTGTGCGGTGGGAGCTTCACTTCGTTGCTGAGCAACACTCAACAGGGTCCTGGTGGGTTTCTGGCTCTGGGTGGGTTTGGGCTTGGTCTTGGGCCTGGCCTCGAAGATGTTGGATTTGGGATGGGGATGGGGAGAGGCGGTTGGGCTTTCCCGGGCGTGGTGGCGGACGGAGGCAGCATTGGCGGCGGTGTTGCGGGCTCCGGTGTTGGGCACACGTGGCAGTTTGAAGGCGGCGATCAAGGTGGCTTTGTTTCTGGAGACTGCTTCCCTTGGCCGGGACTAGCCATTTCCACACCCGGAAATGGTCTCAAATAA 600 0.6033 MPSSDSGESRRSAKPHNTSLAPPPAEQEHLPCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGAPRFGGVVVDGEAKGNNVSLCGGSFTSLLSNTQQGPGGFLALGGFGLGLGPGLEDVGFGMGMGRGGWAFPGVVADGGSIGGGVAGSGVGHTWQFEGGDQGGFVSGDCFPWPGLAISTPGNGLK 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00716 199 MobiDBLite consensus disorder prediction 1 30 - -
Adu05g00716 199 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 76 IPR045174 GO:0003700|GO:0006355
Adu05g00716 199 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Adu05g00716 199 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 87 196 IPR045174 GO:0003700|GO:0006355
Adu05g00716 199 MobiDBLite consensus disorder prediction 1 16 - -
Adu05g00716 199 Pfam Dof domain, zinc finger 28 77 IPR003851 GO:0003677|GO:0006355
Adu05g00716 199 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 76 - -
Adu05g00716 199 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 87 196 - -
Adu05g00716 199 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00716 Adu-Chr5 8461404 8462089 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00716 1 199 C2C2-Dof Transcription Factor Family AT3G50410 44.531 3.88e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu05g00716 zf-Dof 2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00716 - - aip:107620759 251.521