Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00710 ATGATTCAAGAGCTCTTCGCTGGTGCTGGCTTTGTAGCACCTCCTGACAAGAAATACTCCATTAACAACAACAATCTTATTAGTAATAATGGAGGTGGAGGAGGAGGAGGAGGAGGACTTCTCTTACCACCAACACCACCACCTTCTTCTTCTTCTTCTTCTACACCTACTTCTACGGTTGTGGCCGCCACCTCATCAACTAGTTCGGAGAATCTGAGGTGTCCGCGATGCGATTCATCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCATTTCTGCAAGACATGCCGAAGGTACTGGACCAAAGGTGGTGCTCTCAGGAACGTCCCCATCGGCGGTGGCTGCCGGAAAAACAAGAACATCGGTGTCTCCAACTCCTCAGCGGCAAAGGCTGCAAGCACCACCCCGAAGATGAAAGCTATGGTGGCATCAGAGCTCAGAAGATCATCATCATCGCCACTTGGAATCGACCACCACGATCTTCCAGCAGGACCAATCCTATGGGGATCTCCACAGAATAGTCATCTATTGGCGTTACTCCGAGCTGGCCAGAGCCAAAACCCTAACCCTAACCCTAACTCTATGCTCATGAACGGTGTTTCAGTGAAGGAAGAACGGAACTACAACATGGTGAGTAGTACTGCAGTAGAGCCATTGATGATGAATAATAATATTCCAAGAACAACCCTAGGCTATGATGGAGTTGGAGTTGGACACATTCCTCAATTGGATCTGTGCAGCTCTTTGTGGAGAAGCAATAATAATAACAATCAAGATCATCAACCTGCAGCAGCTGCTACTTCCTTTCTACTTTCTGAACAACACCAAACCAGTAGCAATGGAATTCAACAACTTTATCACAAACTCAGGTCAACACCTAATAACTATGCCACTCACAATAATTCATCGCCAATCTTCATGCCAAACATGGCTGCTTCTTCTTCTTCTTCTTCTTTATCCACCATTTTGGAGTCATCTTCGGTTTCCACCGCTGAATTGGGCTGCTGGAATAATCCAACCCTTCCCTGGCTTTCTGATCTTCCTGCTGCAACCAATGGTGCATACCCTAATTAA 1092 0.4643 MIQELFAGAGFVAPPDKKYSINNNNLISNNGGGGGGGGGLLLPPTPPPSSSSSSTPTSTVVAATSSTSSENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNIGVSNSSAAKAASTTPKMKAMVASELRRSSSSPLGIDHHDLPAGPILWGSPQNSHLLALLRAGQSQNPNPNPNSMLMNGVSVKEERNYNMVSSTAVEPLMMNNNIPRTTLGYDGVGVGHIPQLDLCSSLWRSNNNNNQDHQPAAAATSFLLSEQHQTSSNGIQQLYHKLRSTPNNYATHNNSSPIFMPNMAASSSSSSLSTILESSSVSTAELGCWNNPTLPWLSDLPAATNGAYPN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00710 363 ProSitePatterns Zinc finger Dof-type signature. 74 110 IPR003851 GO:0003677|GO:0006355
Adu05g00710 363 ProSiteProfiles Zinc finger Dof-type profile. 72 126 IPR003851 GO:0003677|GO:0006355
Adu05g00710 363 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 44 360 IPR045174 GO:0003700|GO:0006355
Adu05g00710 363 MobiDBLite consensus disorder prediction 32 65 - -
Adu05g00710 363 Pfam Dof domain, zinc finger 71 126 IPR003851 GO:0003677|GO:0006355
Adu05g00710 363 PANTHER F-BOX FAMILY PROTEIN 44 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00710 Adu-Chr5 8387840 8389392 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00710 39 143 C2C2-Dof Transcription Factor Family AT5G60200 57.143 3.90e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu05g00710 zf-Dof 1.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00710 - - adu:107487764 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00710 05 8387840 8389392 Adu05g00710 05 8387840 8389392 ECH