Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu05g00636 | ATGAAACAAACAACAAACAATGCAACAAACACAAACACCTTATCTGCTTTGAACATGAACATGCCTCACACACAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGATGATGATTCTCCCTCCTTCTTCGATGCTCTTCTCTGCGAAGAAGAGAAGAACATTCTCGATGATGATGATGACAACCACCAAAGCAGCCTTCTCATGGACAATCGGGAACACGACCACATCCTCTCTCTTCTCTCCAAAGAGACACACACTCACACCATTCATGCTTTTCTCGAGGCTCCACGAAACGACGCCGTCTCCTGGATTTCCAAAGTTAGCTGCTTCTATGGCTTCACTCCTTTGACCACTGTACTTGCAGTCAACTACTTCGACAGGTTCGTCACAAGCCTAACGTTTCAGAGGGACAAGCCATGGATGACTCAGCTCACTGCTCTTGCCTGTTTATCTCTTGCTGCCAAAATGGAAGAGATCCATGTCCCACTTCTCTTAGACCTCCAAGTGGAGGAACCCAAGTTCTTGTTCGAAGCCAAGACTGTTCAGAGAATGGAGCTTCTTGTGTTGTCTACACTCCAATGGAGGATGAACCCTGTCACCCCAATTTCCTTCTTTGAACACATTGTTAGAAGGATTGGTTTGCATTGGGAGTTCTTATGGAGGTGCCAGCGTGTTCTTCTTTCTGTCATTCCCAATTCAAGGTTCATGGGTTATCTCCCTTCTACATTGGCTGCTGCTACCATGATCCATGTTATTAAAGAGATTGAACCGTTAAATGCAATGGAATACATAAATCAACTCATGGGGTTACTCAAGACTAGTGAGGAACAAGTGAATGAGTGCTACAAACACATAGTGAAACAATTGGTTTTGAATCATGAAGGCATTTACAATGTTTGCCAAAAACGCAAACGGATATCCGAACCAAGTAGCCCCGGGGGTGTAATTGATGCATCATTCAGTTGTGACAGCTCAAATGATTCATGGACAGCAGCATCTTTGATCTCTCCTTCACTATCAATGGAGCCAATGTTTAAGAGGAGCAGAGCTCCGGACCAGCAGATGCGATTCGCCACAGTAAATCGAGTGTCTATCAATGTTATAGATAGTCCTCCTTAA | 1149 | 0.4386 | MKQTTNNATNTNTLSALNMNMPHTQEDEEEEEEEEEEEEEEEEEEDDDSPSFFDALLCEEEKNILDDDDDNHQSSLLMDNREHDHILSLLSKETHTHTIHAFLEAPRNDAVSWISKVSCFYGFTPLTTVLAVNYFDRFVTSLTFQRDKPWMTQLTALACLSLAAKMEEIHVPLLLDLQVEEPKFLFEAKTVQRMELLVLSTLQWRMNPVTPISFFEHIVRRIGLHWEFLWRCQRVLLSVIPNSRFMGYLPSTLAAATMIHVIKEIEPLNAMEYINQLMGLLKTSEEQVNECYKHIVKQLVLNHEGIYNVCQKRKRISEPSSPGGVIDASFSCDSSNDSWTAASLISPSLSMEPMFKRSRAPDQQMRFATVNRVSINVIDSPP | 382 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu05g00636 | 382 | Gene3D | - | 104 | 207 | - | - | |
| Adu05g00636 | 382 | PANTHER | CYCLIN-D3-2 | 48 | 365 | - | - | |
| Adu05g00636 | 382 | Coils | Coil | 21 | 49 | - | - | |
| Adu05g00636 | 382 | Pfam | Cyclin, N-terminal domain | 105 | 207 | IPR006671 | - | |
| Adu05g00636 | 382 | PANTHER | CYCLINS | 48 | 365 | IPR039361 | - | |
| Adu05g00636 | 382 | SMART | cyclin_7 | 112 | 200 | IPR013763 | - | |
| Adu05g00636 | 382 | Gene3D | - | 208 | 295 | - | - | |
| Adu05g00636 | 382 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
| Adu05g00636 | 382 | Pfam | Cyclin, C-terminal domain | 209 | 307 | IPR004367 | - | |
| Adu05g00636 | 382 | MobiDBLite | consensus disorder prediction | 25 | 50 | - | - | |
| Adu05g00636 | 382 | CDD | CYCLIN | 107 | 199 | IPR013763 | - | |
| Adu05g00636 | 382 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Adu05g00636 | 382 | SUPERFAMILY | Cyclin-like | 79 | 207 | IPR036915 | - | |
| Adu05g00636 | 382 | SUPERFAMILY | Cyclin-like | 210 | 305 | IPR036915 | - | |
| Adu05g00636 | 382 | SMART | Cyclin_C_2 | 209 | 322 | IPR004367 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu05g00636 | Adu-Chr5 | 7195143 | 7197012 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu05g00636 | 39 | 372 | Core Cell Cycle Gene Families | AT5G67260 | 47.541 | 6.98e-101 | 303 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Adu05g00636 | 05 | 7195143 | 7197012 | Adu01g01024 | 01 | 15536340 | 15538536 | ECH | |
| Adu08g01021 | 08 | 18365159 | 18366693 | Adu05g00636 | 05 | 7195143 | 7197012 | ECH | |
| Adu06g03152 | 06 | 109741558 | 109743846 | Adu05g00636 | 05 | 7195143 | 7197012 | ECH | |
| Adu05g00636 | 05 | 7195143 | 7197012 | Adu05g00636 | 05 | 7195143 | 7197012 | ECH | |
| Adu05g00636 | 05 | 7195143 | 7197012 | Adu09g02648 | 09 | 113998260 | 114000183 | PCT | |
| Adu01g01024 | 01 | 15536340 | 15538536 | Adu05g00636 | 05 | 7195143 | 7197012 | PCT |