Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03252 ATGGTCTTCCCTTCTCTTCCAATCTATCTTGATCCACCCAACTGGTCACAACAGGCTAATCAGCAATTAGGAATTGGCTCTCAAAATCTTCCAGTTCCGCCAATTTTACAGCCACCTCCTCCAACGATTACATCATCAGTAGTCGTTGGAGGTGGTGGCTACCAGGGCTCTATTCGACCAGGATCAATGGCGGATAGAGCCAGGCTGGCAAAGATACATCAACCTGATGTATCACTCAAGTGTCCGAGGTGCGAATCCACGAACACCAAGTTCTGTTACTACAACAACTACAGCCTCTCGCAGCCTCGCCACTTCTGCAAGACTTGCCGCCGGTACTGGACGAGAGGCGGCGCACTGAGGAATGTTCCGGTCGGCGGCGGATGCAGAAGGAATAAGAGAAGCAAAGGAACAACAAACACCAACACCAACAGATCTAGGTCTCCTTTGAAATCTGATCATCATCATCATCATCATCATTTGAATCTGCATGGTGGTGCAGTTGGAGGTTCTAGCTCTGCAAGTGGCAACTCTTCTTCAAGTGGCCGCAATAATAGTAACAGCAACAACAACAATAATGATCTGAATGTGATGAATCATATGCAAACTCCACCACCAACCCATCATCATCATCAATTTCCGTTCTTGCCAACAACAACTTTGCATCACTATAGTAGTGATCATGCATCATCACTTCTTTTTGGCCCAAACCCTCCTTCATCTTCTTTGTTGGTTAGAAATGGTGGCAACACAGGTAGTGATGGCGAGTTTCAAATTGGAGCTAATAGCAATAACAATGGTGGTTCTGGTTCTGTGTTACAGCAATGGAGGCTACCAAGTTTGCAACAGTTCCCTAATTTCCTGAGTAATTTGGAACCGCCACAACCACAACCGCAACCGCCACAAATCGGTTTGTTTCATCAATTTGATCAAGAAAATGGTGAATATGTGAGGGACCATCATGGAGGTAGGTTTCGTTGTTCTAGTAATAGTAACATTAATAAGACAATGGCTGATGATTCTAGTGTTGTCGTTGTTGGTGGAATGATACCTCATCATCATGAGGTTAACAATAATTCGGTGAAAATGGAAGAGAATAATAATAGTAAAAATAATAATCAAGGAGGGTTGAGTTTATTTTCTAAGAACAATGTTTTGGGTAGCAATGATCTATTTTGGAGTAGTAGTAATGGTGGAAGTGGCAATGTTAATGCATGGAATGAAGCTCCTAGTTTCGCTTCGCCAACAAATCAGTTATTGTGA 1260 0.4317 MVFPSLPIYLDPPNWSQQANQQLGIGSQNLPVPPILQPPPPTITSSVVVGGGGYQGSIRPGSMADRARLAKIHQPDVSLKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGTTNTNTNRSRSPLKSDHHHHHHHLNLHGGAVGGSSSASGNSSSSGRNNSNSNNNNNDLNVMNHMQTPPPTHHHHQFPFLPTTTLHHYSSDHASSLLFGPNPPSSSLLVRNGGNTGSDGEFQIGANSNNNGGSGSVLQQWRLPSLQQFPNFLSNLEPPQPQPQPPQIGLFHQFDQENGEYVRDHHGGRFRCSSNSNINKTMADDSSVVVVGGMIPHHHEVNNNSVKMEENNNSKNNNQGGLSLFSKNNVLGSNDLFWSSSNGGSGNVNAWNEAPSFASPTNQLL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03252 419 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677|GO:0006355
Adu04g03252 419 Pfam Dof domain, zinc finger 78 133 IPR003851 GO:0003677|GO:0006355
Adu04g03252 419 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677|GO:0006355
Adu04g03252 419 MobiDBLite consensus disorder prediction 132 146 - -
Adu04g03252 419 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 385 IPR045174 GO:0003700|GO:0006355
Adu04g03252 419 MobiDBLite consensus disorder prediction 167 205 - -
Adu04g03252 419 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 6 385 - -
Adu04g03252 419 MobiDBLite consensus disorder prediction 120 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03252 Adu-Chr4 120557912 120560057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03252 58 135 C2C2-Dof Transcription Factor Family AT2G37590 82.051 1.65e-43 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu04g03252 zf-Dof 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03252 - - adu:107486952 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g03252 04 120557912 120560057 Adu04g03252 04 120557912 120560057 ECH