Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu04g02982 | ATGGGTTCTGTTTGTTGTTGTTTGAGTGTTAATGATTTTGAAGATTATATGAATCCAAATAGTCCTGTATATAGGAACTGTGGGTGCCTCAGTTCCGTCTTACAGAACTTTTTGAATGCGTATGCATCAATATTCCGTAGAGGGGAAATGCAGGCAATTCCTTCATCTATACAGGGGGCAGCATCTATGACTACCACAGCATCACTTGATAATTCTCTATCTGACATGTACCGCTCTCCTCCAAGGCCAATGCCTTATGATGCAGACCCAAGGCATTTCCGCTCTCAGCATGATAGACTAGTTTCACGACGTGATAAGGGTTCAAGTCATGTGAATGATGAGGCAGAACCTCTAAGAAGTGATCTAGATGAGGATGACCAACAATCTTTAACTTCAAGCAACAAGTGGCATGAACGTGCCAGTGAAGATGGATCCAAAGAATACCATTCTAAGTCTTTAACAAGGCTTTCATCAGCAAAACCTACCACTGGAGTTGGACTTGTCTATTCGTCCTCAGAAGAGGAGGATTGCTGTCCAACTTGTCTTGAAGAATATACTGAAGAGAATCCGAAGATAGTGACAAAATGCTCTCATCATTTTCATCTTGGTTGCATTTATGAGTGGATGGAGAGAAGTGACACCTGTCCAGTTTGTGGAAAGGTGATGGTATTTGATGAAACGACGTAA | 687 | 0.4178 | MGSVCCCLSVNDFEDYMNPNSPVYRNCGCLSSVLQNFLNAYASIFRRGEMQAIPSSIQGAASMTTTASLDNSLSDMYRSPPRPMPYDADPRHFRSQHDRLVSRRDKGSSHVNDEAEPLRSDLDEDDQQSLTSSNKWHERASEDGSKEYHSKSLTRLSSAKPTTGVGLVYSSSEEEDCCPTCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDTCPVCGKVMVFDETT | 228 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu04g02982 | 228 | MobiDBLite | consensus disorder prediction | 71 | 155 | - | - | |
| Adu04g02982 | 228 | Pfam | RING-H2 zinc finger domain | 173 | 218 | IPR024766 | GO:0008270 | |
| Adu04g02982 | 228 | SUPERFAMILY | RING/U-box | 173 | 225 | - | - | |
| Adu04g02982 | 228 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 151 | 225 | IPR013083 | - | |
| Adu04g02982 | 228 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 227 | - | - | |
| Adu04g02982 | 228 | MobiDBLite | consensus disorder prediction | 85 | 150 | - | - | |
| Adu04g02982 | 228 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 1 | 227 | - | - | |
| Adu04g02982 | 228 | SMART | ring_2 | 178 | 218 | IPR001841 | - | |
| Adu04g02982 | 228 | ProSiteProfiles | Zinc finger RING-type profile. | 178 | 218 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu04g02982 | Adu-Chr4 | 118065299 | 118069463 | Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Adu04g02982 | 04 | 118065299 | 118069463 | Adu04g02982 | 04 | 118065299 | 118069463 | ECH |