Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02886 ATGATTGCTGATGTCTCAAAGTCAGACAAAATCGTTGTTGAGAAATCCACTGTCCCTGTCAAGACAGCTGAGGCTATAGAGAAAATTTTGACTCACAATAGCAAGGGAATCAAGTTCCAGATCCTGTCAAACCCGGAATTCCTTGCCGAGGGAACTGCAATTGAAGACCTTTTCAAGCCAGACCGTGTCCTTATCGGTGGCCGGGAGACCCCAGAAGGCCAGAAAGCTCTCCAAACATTGAAGGAAGTTTATGCTCACTGGGTCCCTGAAGAGAGAATCCTAACCACTAACCTGTGGTCTGCTGAGCTGTCTAAGCTTGCTGCCAATGCCTTCTTGGCACAGAGGATTTCATCTGTTAATGCAATGTCGGCGCTTTGTGAGGCTACCGGGGCAAATATCCAGCAGGTGTCCTTTGCTGTGGGTACTGACACAAGAATTGGACCCAAGTTCCTCAATGCCAGTGTTGGATTTGGTGGATCCTGCTTCCAGAAGGATATCCTGAACCTTGTCTACATCTGTGAGTGCAACGGCCTTCCTGAGGTGGCCGAGTACTGGAAGCAAGTCATCAAGATCAATGATTACCAGAAGAGCCGGTTCGTGAACCGTGTAGTCTCATCAATGTTCAACACTGTCTCAAGCAAGAAGGTTGCCATTCTTGGATTTGCCTTCAAGAAAGATACCGGTGACACAAGGGAGACTCCGGCCATTGACGTGTGCAAGGGGCTACTTGGCGACAAGGCCAACCTAAGCATATATGATCCACAGGTAACTGAGGACCAAATCCAGAGGGATCTGTCGATGAACAAGTTCGATTGGGACCATCCGATCCACTTGCAGCCGACTAGTCCTTCTACCGTGAAGAAAGTGAGTGTGGTTTGGGATGCATATGAAGCCACAAAGGATGCACATGGAATCTGCATTCTTACTGAGTGGGATGAGTTCAAGACCCTTGATTACCAGAGGATCTATGAGAACATGCAGAAGCCAGCATTTGTTTTTGATGGAAGAAACATCGTTGATGCTGATAAGTTGCGTGATATTGGATTCATTGTTTACTCAATTGGTAAGCCACTTGATGCTTGGCTCAAGGACATGCCTGCTGTGGTGGCATAG 1113 0.4762 MIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIEDLFKPDRVLIGGRETPEGQKALQTLKEVYAHWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANIQQVSFAVGTDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVSSMFNTVSSKKVAILGFAFKKDTGDTRETPAIDVCKGLLGDKANLSIYDPQVTEDQIQRDLSMNKFDWDHPIHLQPTSPSTVKKVSVVWDAYEATKDAHGICILTEWDEFKTLDYQRIYENMQKPAFVFDGRNIVDADKLRDIGFIVYSIGKPLDAWLKDMPAVVA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02886 370 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 1 368 - -
Adu04g02886 370 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 204 352 IPR036220 -
Adu04g02886 370 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 217 340 IPR014027 GO:0016616|GO:0051287
Adu04g02886 370 Gene3D - 130 368 - -
Adu04g02886 370 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 368 IPR028356 GO:0003979
Adu04g02886 370 PIRSF UDPglc_DH_bac 1 358 IPR028357 GO:0000271|GO:0003979
Adu04g02886 370 Gene3D - 1 97 - -
Adu04g02886 370 Gene3D - 98 129 - -
Adu04g02886 370 SMART UDPG_MGDP_dh_C_a_2_a 217 341 IPR014027 GO:0016616|GO:0051287
Adu04g02886 370 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 74 IPR001732 GO:0016616|GO:0051287
Adu04g02886 370 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 103 IPR036291 -
Adu04g02886 370 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 99 198 IPR008927 -
Adu04g02886 370 PIRSF UDPglc_GDPman_dh 1 356 IPR017476 GO:0016616
Adu04g02886 370 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 99 193 IPR014026 GO:0016616|GO:0051287
Adu04g02886 370 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 2 337 IPR017476 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02886 Adu-Chr4 116965860 116967344 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02886 04 116965860 116967344 Adu04g02886 04 116965860 116967344 ECH
Adu04g02886 04 116965860 116967344 Adu01g03222 01 104625904 104628427 ECH
Adu10g02397 10 99619791 99622667 Adu04g02886 04 116965860 116967344 PCT